HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:723.7 nTPM
HPA Brain:252.3 nTPM
GTEx:723.7 nTPM
FANTOM5:202.8 Scaled Tags Per Million
Pig:0.1 nTPM
Mouse:58.1 nTPM
Allen mouse:10.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA064222
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 252.3
Sample id Sample description nTPM
Hippocampus
nTPM: 252.3
2529 Female, age 94, left hemisphere 291.3
1898 Male, age 80, left hemisphere 274.1
2621 Female, age 67, right hemisphere 264.3
1911 Female, age 85, right hemisphere 239.7
1855 Male, age 76, left hemisphere 226.7
2148 Female, age 91, left hemisphere 217.7
Dentate gyrus
nTPM: 241.3
2530 Female, age 94, left hemisphere 323.1
2531 Female, age 67, both hemispheres 259.0
2010 Male, age 76, both hemispheres 256.7
2246 Female, age 85, both hemispheres 216.1
2528 Male, age 74, both hemispheres 198.3
1927 Female, age 91, both hemispheres 194.5
Entorhinal gyrus
nTPM: 235.3
2686 Male, age 75, right hemisphere 300.8
2117 Female, age 91, right hemisphere 257.5
1787 Male, age 76, left hemisphere 235.9
1938 Female, age 85, left hemisphere 217.7
2764 Male, age 80, right hemisphere 213.1
2613 Female, age 94, left hemisphere 187.1
Hippocampus, CA1
nTPM: 218.0
1873 Female, age 85, both hemispheres 236.3
2527 Male, age 74, both hemispheres 222.4
2045 Male, age 76, both hemispheres 218.0
2082 Female, age 91, right hemisphere 214.5
2749 Male, age 80, left hemisphere 198.5
Hippocampus, CA2
nTPM: 230.7
2437 Female, age 94, left hemisphere 255.4
1940 Female, age 85, left hemisphere 246.6
1963 Male, age 80, left hemisphere 243.2
1892 Male, age 76, both hemispheres 223.9
2113 Female, age 91, right hemisphere 212.5
2249 Male, age 74, both hemispheres 202.6
Hippocampus, CA3
nTPM: 223.8
2861 Female, age 67, both hemispheres 265.8
1867 Male, age 76, both hemispheres 263.6
1891 Female, age 85, both hemispheres 248.8
2436 Male, age 74, both hemispheres 200.1
2137 Male, age 80, left hemisphere 193.0
2620 Female, age 94, left hemisphere 171.6
Parahippocampal cortex
nTPM: 212.9
2018 Male, age 76, both hemispheres 272.5
2245 Female, age 91, both hemispheres 232.8
2692 Male, age 74, both hemispheres 218.2
1850 Male, age 80, both hemispheres 215.3
1990 Female, age 91, right hemisphere 212.7
2250 Female, age 67, right hemisphere 211.3
2532 Female, age 72, left hemisphere 208.8
1933 Female, age 85, both hemispheres 205.8
2622 Female, age 67, right hemisphere 197.4
2693 Female, age 94, both hemispheres 154.4
Perirhinal gyrus
nTPM: 198.7
1841 Female, age 85, right hemisphere 217.1
1794 Male, age 80, right hemisphere 211.8
1847 Female, age 91, left hemisphere 204.1
2848 Male, age 76, right hemisphere 182.4
2521 Female, age 94, right hemisphere 178.3
Subiculum
nTPM: 251.8
2042 Male, age 76, both hemispheres 315.3
2438 Female, age 94, left hemisphere 274.3
1901 Male, age 80, both hemispheres 253.1
1977 Female, age 85, both hemispheres 247.6
2619 Male, age 74, both hemispheres 224.9
2729 Female, age 91, right hemisphere 195.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 723.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 723.7
Samples: 255

Max nTPM: 2064.9
Min nTPM: 263.9
Std nTPM: 257.5
Median nTPM: 664.9
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 2064.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1837.1
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 1621.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1538.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1501.2
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 1487.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1429.2
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 1312.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1291.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1254.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 1238.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 202.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 202.8
FF:10153-102I9 76 years, female 226.9
FF:10169-103B7 60 years, female 178.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 0.1
Pig sample Sample description nTPM
Subiculum
nTPM: 0.1
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.2
Sample C Male 0.1
Sample D Male 0.0
Dorsal hippocampus
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0
Entorhinal cortex
nTPM: 0.1
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.0
Sample A Female 0.1
Sample B Female 0.1
Sample C Male 0.2
Sample D Male 0.0
Ventral hippocampus
nTPM: 0.1
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.1
Sample B Female 0.1
Sample C Male 0.1
Sample D Male 0.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 58.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.1
Samples: 4

Max nTPM: 67.0
Min nTPM: 48.5
Sample A Male 60.8
Sample B Male 67.0
Sample C Female 48.5
Sample D Female 56.1
Hippocampal formation
nTPM: 58.1
Samples: 4

Max nTPM: 71.7
Min nTPM: 44.2
Sample A Male 59.2
Sample B Male 57.1
Sample C Female 44.2
Sample D Female 71.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 10.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.7
69818379 Antisense, RP_050510_04_H09, Mouse strain C57BL/6J (56 days, male) 10.7

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