A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1148.3
nTPM
Monaco:
424.3
nTPM
Schmiedel:
694.6
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
1148.3
HPA sample
nTPM
Classical monocyte nTPM: 1148.3
Samples: 6
Max nTPM: 1761.2
Min nTPM: 826.0
P10809_1003
1761.2
P10809_1020
826.0
P10809_1039
1014.5
P10809_1058
1060.4
P10809_1080
923.4
P10809_1107
1304.5
Intermediate monocyte nTPM: 933.8
Samples: 6
Max nTPM: 1467.7
Min nTPM: 628.6
P10809_1004
651.4
P10809_1023
929.8
P10809_1042
935.0
P10809_1061
628.6
P10809_1081
990.2
P10809_1108
1467.7
Non-classical monocyte nTPM: 804.6
Samples: 5
Max nTPM: 1067.2
Min nTPM: 673.1
P10809_1005
737.4
P10809_1053
711.6
P10809_1072
673.1
P10809_1082
833.9
P10809_1109
1067.2
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
424.3
Monaco sample
nTPM
Classical monocyte nTPM: 257.1
Samples: 4
Max nTPM: 362.3
Min nTPM: 183.1
RHH5313_R3680
362.3
RHH5221_R3593
183.1
RHH5250_R3622
226.3
RHH5279_R3651
256.5
Intermediate monocyte nTPM: 424.3
Samples: 4
Max nTPM: 588.7
Min nTPM: 255.7
RHH5314_R3681
474.7
RHH5222_R3594
378.1
RHH5251_R3623
588.7
RHH5280_R3652
255.7
Non-classical monocyte nTPM: 303.1
Samples: 4
Max nTPM: 437.1
Min nTPM: 155.5
RHH5315_R3682
437.1
RHH5223_R3595
233.1
RHH5252_R3624
386.8
RHH5281_R3653
155.5
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
694.6
Schmiedel sample id
TPM
Classical monocyte TPM: 694.6
Samples: 91
Max TPM: 1084.7
Min TPM: 383.9
MONOCYTES_1
1084.7
MONOCYTES_2
955.7
MONOCYTES_3
948.6
MONOCYTES_4
897.4
MONOCYTES_5
896.1
MONOCYTES_6
892.8
MONOCYTES_7
892.7
MONOCYTES_8
892.6
MONOCYTES_9
873.9
MONOCYTES_10
856.8
MONOCYTES_11
832.2
MONOCYTES_12
822.9
MONOCYTES_13
819.0
MONOCYTES_14
817.6
MONOCYTES_15
817.2
MONOCYTES_16
814.7
MONOCYTES_17
814.6
MONOCYTES_18
804.8
MONOCYTES_19
799.0
MONOCYTES_20
793.5
MONOCYTES_21
786.8
MONOCYTES_22
777.1
MONOCYTES_23
774.3
MONOCYTES_24
770.7
MONOCYTES_25
770.2
MONOCYTES_26
766.4
MONOCYTES_27
757.9
MONOCYTES_28
748.5
MONOCYTES_29
747.7
MONOCYTES_30
747.1
MONOCYTES_31
739.3
MONOCYTES_32
737.5
MONOCYTES_33
736.7
MONOCYTES_34
733.7
MONOCYTES_35
729.3
MONOCYTES_36
729.1
MONOCYTES_37
728.8
MONOCYTES_38
721.0
MONOCYTES_39
719.4
MONOCYTES_40
717.6
MONOCYTES_41
717.5
MONOCYTES_42
712.2
MONOCYTES_43
711.3
MONOCYTES_44
704.8
MONOCYTES_45
701.1
MONOCYTES_46
698.2
MONOCYTES_47
697.8
MONOCYTES_48
697.7
MONOCYTES_49
697.0
MONOCYTES_50
689.0
MONOCYTES_51
688.0
MONOCYTES_52
687.5
MONOCYTES_53
681.2
MONOCYTES_54
664.7
MONOCYTES_55
661.4
MONOCYTES_56
659.0
MONOCYTES_57
657.3
MONOCYTES_58
649.7
MONOCYTES_59
649.2
MONOCYTES_60
648.9
MONOCYTES_61
644.9
MONOCYTES_62
641.8
MONOCYTES_63
641.7
MONOCYTES_64
628.2
MONOCYTES_65
627.6
MONOCYTES_66
623.9
MONOCYTES_67
623.7
MONOCYTES_68
617.6
MONOCYTES_69
615.7
MONOCYTES_70
613.6
MONOCYTES_71
597.1
MONOCYTES_72
592.6
MONOCYTES_73
582.9
MONOCYTES_74
579.0
MONOCYTES_75
578.3
MONOCYTES_76
574.1
MONOCYTES_77
573.0
MONOCYTES_78
568.0
MONOCYTES_79
568.0
MONOCYTES_80
538.2
MONOCYTES_81
509.9
MONOCYTES_82
509.8
MONOCYTES_83
508.8
MONOCYTES_84
494.5
MONOCYTES_85
486.7
MONOCYTES_86
483.6
MONOCYTES_87
482.6
MONOCYTES_88
470.9
MONOCYTES_89
470.5
MONOCYTES_90
441.5
MONOCYTES_91
383.9
Show allShow less
Non-classical monocyte TPM: 502.0
Samples: 90
Max TPM: 843.1
Min TPM: 178.6
M2_1
843.1
M2_2
741.0
M2_3
731.2
M2_4
724.1
M2_5
708.3
M2_6
696.6
M2_7
679.1
M2_8
679.0
M2_9
641.4
M2_10
640.6
M2_11
640.3
M2_12
639.5
M2_13
637.0
M2_14
635.6
M2_15
632.8
M2_16
632.7
M2_17
631.0
M2_18
626.5
M2_19
626.4
M2_20
620.1
M2_21
615.6
M2_22
610.7
M2_23
608.4
M2_24
607.5
M2_25
606.6
M2_26
596.5
M2_27
591.7
M2_28
589.8
M2_29
582.3
M2_30
580.1
M2_31
578.5
M2_32
571.8
M2_33
568.1
M2_34
566.4
M2_35
565.5
M2_36
555.7
M2_37
554.5
M2_38
554.0
M2_39
541.0
M2_40
538.2
M2_41
533.8
M2_42
533.2
M2_43
531.6
M2_44
529.0
M2_45
515.0
M2_46
510.2
M2_47
509.0
M2_48
506.9
M2_49
498.0
M2_50
492.0
M2_51
491.8
M2_52
490.7
M2_53
480.0
M2_54
477.8
M2_55
477.2
M2_56
474.1
M2_57
471.5
M2_58
442.7
M2_59
435.5
M2_60
431.9
M2_61
430.1
M2_62
426.5
M2_63
415.9
M2_64
415.4
M2_65
414.8
M2_66
413.9
M2_67
409.4
M2_68
405.8
M2_69
401.0
M2_70
396.5
M2_71
396.3
M2_72
394.9
M2_73
388.8
M2_74
385.1
M2_75
375.2
M2_76
371.2
M2_77
367.5
M2_78
351.4
M2_79
329.8
M2_80
324.3
M2_81
306.6
M2_82
290.8
M2_83
267.1
M2_84
265.5
M2_85
257.2
M2_86
250.7
M2_87
248.0
M2_88
244.9
M2_89
231.7
M2_90
178.6
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.