A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1002.6
nTPM
Monaco:
75.2
nTPM
Schmiedel:
174.2
TPM
NK-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
1002.6
HPA sample
nTPM
NK-cell nTPM: 1002.7
Samples: 6
Max nTPM: 1264.7
Min nTPM: 791.8
P10809_1013
791.8
P10809_1033
1109.1
P10809_1052
920.3
P10809_1071
997.3
P10809_1093
932.7
P10809_1103
1264.7
NK-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
75.2
Monaco sample
nTPM
NK-cell nTPM: 75.2
Samples: 4
Max nTPM: 87.1
Min nTPM: 50.0
RHH5316_R3683
86.0
RHH5224_R3596
50.0
RHH5253_R3625
87.1
RHH5282_R3654
77.6
NK-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
174.2
Schmiedel sample id
TPM
NK-cell TPM: 174.2
Samples: 90
Max TPM: 313.8
Min TPM: 56.6
NK_1
313.8
NK_2
298.3
NK_3
289.4
NK_4
282.8
NK_5
281.3
NK_6
268.1
NK_7
266.7
NK_8
264.3
NK_9
262.0
NK_10
260.2
NK_11
255.0
NK_12
255.0
NK_13
254.7
NK_14
250.7
NK_15
247.1
NK_16
242.9
NK_17
242.5
NK_18
242.1
NK_19
234.1
NK_20
224.7
NK_21
215.9
NK_22
215.5
NK_23
215.0
NK_24
212.0
NK_25
210.7
NK_26
209.7
NK_27
209.3
NK_28
204.7
NK_29
204.6
NK_30
202.1
NK_31
202.0
NK_32
198.8
NK_33
197.4
NK_34
197.3
NK_35
195.8
NK_36
194.3
NK_37
192.6
NK_38
191.4
NK_39
187.2
NK_40
183.9
NK_41
179.1
NK_42
178.9
NK_43
177.9
NK_44
175.4
NK_45
174.3
NK_46
171.7
NK_47
169.4
NK_48
166.9
NK_49
166.3
NK_50
165.2
NK_51
164.8
NK_52
163.6
NK_53
157.0
NK_54
157.0
NK_55
156.3
NK_56
155.6
NK_57
154.2
NK_58
151.0
NK_59
150.7
NK_60
147.0
NK_61
143.3
NK_62
139.5
NK_63
138.8
NK_64
138.6
NK_65
134.9
NK_66
134.2
NK_67
130.9
NK_68
130.3
NK_69
121.2
NK_70
121.0
NK_71
119.5
NK_72
114.0
NK_73
109.1
NK_74
107.3
NK_75
106.1
NK_76
105.5
NK_77
105.2
NK_78
104.5
NK_79
95.4
NK_80
90.1
NK_81
85.0
NK_82
84.6
NK_83
80.5
NK_84
78.5
NK_85
77.0
NK_86
75.0
NK_87
72.8
NK_88
64.1
NK_89
58.5
NK_90
56.6
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.