A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1142.1
nTPM
Monaco:
190.4
nTPM
Schmiedel:
209.9
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
1142.1
HPA sample
nTPM
Classical monocyte nTPM: 1142.1
Samples: 6
Max nTPM: 1872.9
Min nTPM: 794.1
P10809_1003
1872.9
P10809_1020
794.1
P10809_1039
990.3
P10809_1058
931.5
P10809_1080
849.6
P10809_1107
1414.3
Intermediate monocyte nTPM: 1007.0
Samples: 6
Max nTPM: 1781.1
Min nTPM: 569.6
P10809_1004
775.8
P10809_1023
1046.2
P10809_1042
997.2
P10809_1061
569.6
P10809_1081
872.1
P10809_1108
1781.1
Non-classical monocyte nTPM: 863.8
Samples: 5
Max nTPM: 1293.7
Min nTPM: 694.5
P10809_1005
863.5
P10809_1053
694.5
P10809_1072
726.3
P10809_1082
740.8
P10809_1109
1293.7
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
190.4
Monaco sample
nTPM
Classical monocyte nTPM: 116.2
Samples: 4
Max nTPM: 151.5
Min nTPM: 85.4
RHH5313_R3680
151.5
RHH5221_R3593
106.5
RHH5250_R3622
85.4
RHH5279_R3651
121.5
Intermediate monocyte nTPM: 190.4
Samples: 4
Max nTPM: 237.5
Min nTPM: 108.8
RHH5314_R3681
182.1
RHH5222_R3594
237.5
RHH5251_R3623
233.3
RHH5280_R3652
108.8
Non-classical monocyte nTPM: 114.6
Samples: 4
Max nTPM: 153.6
Min nTPM: 74.0
RHH5315_R3682
153.6
RHH5223_R3595
98.1
RHH5252_R3624
132.8
RHH5281_R3653
74.0
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
209.9
Schmiedel sample id
TPM
Classical monocyte TPM: 209.9
Samples: 91
Max TPM: 345.8
Min TPM: 99.8
MONOCYTES_1
345.8
MONOCYTES_2
344.3
MONOCYTES_3
322.3
MONOCYTES_4
321.2
MONOCYTES_5
302.6
MONOCYTES_6
300.7
MONOCYTES_7
298.2
MONOCYTES_8
296.9
MONOCYTES_9
290.1
MONOCYTES_10
286.4
MONOCYTES_11
285.4
MONOCYTES_12
283.8
MONOCYTES_13
276.3
MONOCYTES_14
270.0
MONOCYTES_15
269.1
MONOCYTES_16
268.3
MONOCYTES_17
267.7
MONOCYTES_18
265.2
MONOCYTES_19
264.2
MONOCYTES_20
260.2
MONOCYTES_21
254.3
MONOCYTES_22
253.7
MONOCYTES_23
253.0
MONOCYTES_24
252.3
MONOCYTES_25
250.5
MONOCYTES_26
247.0
MONOCYTES_27
246.9
MONOCYTES_28
246.3
MONOCYTES_29
242.2
MONOCYTES_30
241.7
MONOCYTES_31
241.3
MONOCYTES_32
239.1
MONOCYTES_33
238.7
MONOCYTES_34
234.9
MONOCYTES_35
233.9
MONOCYTES_36
230.4
MONOCYTES_37
230.2
MONOCYTES_38
228.1
MONOCYTES_39
224.4
MONOCYTES_40
222.9
MONOCYTES_41
219.0
MONOCYTES_42
215.5
MONOCYTES_43
213.1
MONOCYTES_44
212.6
MONOCYTES_45
209.7
MONOCYTES_46
204.2
MONOCYTES_47
197.2
MONOCYTES_48
196.5
MONOCYTES_49
194.4
MONOCYTES_50
194.4
MONOCYTES_51
190.0
MONOCYTES_52
188.6
MONOCYTES_53
187.0
MONOCYTES_54
185.0
MONOCYTES_55
184.4
MONOCYTES_56
184.3
MONOCYTES_57
184.1
MONOCYTES_58
182.7
MONOCYTES_59
180.3
MONOCYTES_60
179.2
MONOCYTES_61
176.2
MONOCYTES_62
175.5
MONOCYTES_63
175.0
MONOCYTES_64
174.1
MONOCYTES_65
173.5
MONOCYTES_66
172.3
MONOCYTES_67
170.5
MONOCYTES_68
170.1
MONOCYTES_69
169.9
MONOCYTES_70
169.6
MONOCYTES_71
168.3
MONOCYTES_72
162.4
MONOCYTES_73
162.1
MONOCYTES_74
157.5
MONOCYTES_75
152.9
MONOCYTES_76
149.3
MONOCYTES_77
147.8
MONOCYTES_78
147.1
MONOCYTES_79
142.2
MONOCYTES_80
139.6
MONOCYTES_81
135.5
MONOCYTES_82
135.0
MONOCYTES_83
127.2
MONOCYTES_84
126.3
MONOCYTES_85
122.6
MONOCYTES_86
122.5
MONOCYTES_87
116.1
MONOCYTES_88
115.1
MONOCYTES_89
110.8
MONOCYTES_90
101.9
MONOCYTES_91
99.8
Show allShow less
Non-classical monocyte TPM: 159.8
Samples: 90
Max TPM: 329.4
Min TPM: 46.9
M2_1
329.4
M2_2
291.5
M2_3
273.6
M2_4
272.8
M2_5
272.4
M2_6
254.6
M2_7
253.9
M2_8
251.9
M2_9
249.9
M2_10
242.1
M2_11
238.0
M2_12
234.5
M2_13
224.7
M2_14
220.0
M2_15
217.1
M2_16
214.0
M2_17
212.2
M2_18
210.9
M2_19
210.1
M2_20
203.6
M2_21
202.8
M2_22
201.0
M2_23
200.2
M2_24
198.5
M2_25
198.3
M2_26
195.9
M2_27
195.7
M2_28
194.9
M2_29
188.8
M2_30
188.4
M2_31
188.0
M2_32
187.2
M2_33
186.3
M2_34
186.1
M2_35
184.1
M2_36
184.0
M2_37
182.4
M2_38
179.3
M2_39
174.0
M2_40
172.5
M2_41
169.5
M2_42
166.9
M2_43
162.8
M2_44
162.4
M2_45
161.3
M2_46
160.0
M2_47
158.0
M2_48
154.3
M2_49
153.8
M2_50
153.4
M2_51
150.1
M2_52
145.9
M2_53
142.4
M2_54
138.5
M2_55
137.1
M2_56
137.1
M2_57
133.5
M2_58
130.9
M2_59
129.0
M2_60
125.6
M2_61
123.9
M2_62
123.5
M2_63
122.1
M2_64
121.2
M2_65
121.0
M2_66
119.1
M2_67
114.5
M2_68
112.9
M2_69
111.0
M2_70
108.9
M2_71
106.5
M2_72
100.3
M2_73
97.9
M2_74
96.2
M2_75
94.3
M2_76
92.2
M2_77
92.1
M2_78
89.2
M2_79
89.2
M2_80
87.8
M2_81
84.3
M2_82
72.9
M2_83
67.6
M2_84
62.3
M2_85
61.1
M2_86
60.0
M2_87
57.1
M2_88
56.5
M2_89
47.4
M2_90
46.9
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.