HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:1592.2 nTPM
HPA Brain:286.1 nTPM
GTEx:1592.2 nTPM
FANTOM5:351.0 Scaled Tags Per Million
Pig:363.8 nTPM
Mouse:663.6 nTPM
Allen mouse:5.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006124
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 286.1
Sample id Sample description nTPM
Hippocampus
nTPM: 284.1
1898 Male, age 80, left hemisphere 325.5
2529 Female, age 94, left hemisphere 315.6
2621 Female, age 67, right hemisphere 280.3
1911 Female, age 85, right hemisphere 267.9
1855 Male, age 76, left hemisphere 260.7
2148 Female, age 91, left hemisphere 254.5
Dentate gyrus
nTPM: 275.6
2530 Female, age 94, left hemisphere 410.6
2010 Male, age 76, both hemispheres 351.2
2531 Female, age 67, both hemispheres 234.2
2246 Female, age 85, both hemispheres 227.6
1927 Female, age 91, both hemispheres 219.5
2528 Male, age 74, both hemispheres 210.5
Entorhinal gyrus
nTPM: 269.3
2686 Male, age 75, right hemisphere 354.1
1787 Male, age 76, left hemisphere 286.3
2117 Female, age 91, right hemisphere 273.3
2764 Male, age 80, right hemisphere 250.5
1938 Female, age 85, left hemisphere 245.5
2613 Female, age 94, left hemisphere 206.1
Hippocampus, CA1
nTPM: 258.0
2045 Male, age 76, both hemispheres 299.2
1873 Female, age 85, both hemispheres 292.7
2749 Male, age 80, left hemisphere 235.2
2082 Female, age 91, right hemisphere 234.0
2527 Male, age 74, both hemispheres 229.1
Hippocampus, CA2
nTPM: 267.1
1892 Male, age 76, both hemispheres 307.9
1963 Male, age 80, left hemisphere 291.3
2437 Female, age 94, left hemisphere 280.4
2249 Male, age 74, both hemispheres 246.4
2113 Female, age 91, right hemisphere 240.6
1940 Female, age 85, left hemisphere 236.1
Hippocampus, CA3
nTPM: 236.0
1867 Male, age 76, both hemispheres 349.0
1891 Female, age 85, both hemispheres 330.2
2861 Female, age 67, both hemispheres 208.1
2137 Male, age 80, left hemisphere 193.4
2436 Male, age 74, both hemispheres 193.0
2620 Female, age 94, left hemisphere 142.0
Parahippocampal cortex
nTPM: 242.7
2018 Male, age 76, both hemispheres 390.4
1850 Male, age 80, both hemispheres 257.1
2532 Female, age 72, left hemisphere 247.3
1990 Female, age 91, right hemisphere 239.4
2245 Female, age 91, both hemispheres 238.9
2692 Male, age 74, both hemispheres 235.3
2250 Female, age 67, right hemisphere 231.1
1933 Female, age 85, both hemispheres 229.3
2622 Female, age 67, right hemisphere 192.6
2693 Female, age 94, both hemispheres 165.3
Perirhinal gyrus
nTPM: 232.4
1841 Female, age 85, right hemisphere 261.8
2848 Male, age 76, right hemisphere 248.6
1847 Female, age 91, left hemisphere 239.3
1794 Male, age 80, right hemisphere 233.2
2521 Female, age 94, right hemisphere 179.0
Subiculum
nTPM: 286.1
2042 Male, age 76, both hemispheres 399.8
1977 Female, age 85, both hemispheres 327.0
2438 Female, age 94, left hemisphere 294.5
1901 Male, age 80, both hemispheres 268.4
2729 Female, age 91, right hemisphere 222.5
2619 Male, age 74, both hemispheres 204.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 1592.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1592.2
Samples: 255

Max nTPM: 4835.3
Min nTPM: 517.7
Std nTPM: 654.0
Median nTPM: 1420.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 4835.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 4567.9
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 4530.5
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 4158.6
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 3867.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 3537.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 3406.3
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 3348.4
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 2831.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 2809.0
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 2715.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 351.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 351.0
FF:10169-103B7 60 years, female 356.2
FF:10153-102I9 76 years, female 345.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 363.8
Pig sample Sample description nTPM
Subiculum
nTPM: 289.4
Samples: 4

Max nTPM: 388.8
Min nTPM: 227.9
Sample A Female 388.8
Sample B Female 293.0
Sample C Male 227.9
Sample D Male 247.8
Dorsal hippocampus
nTPM: 363.9
Samples: 4

Max nTPM: 476.1
Min nTPM: 247.1
Sample A Female 476.1
Sample B Female 322.7
Sample C Male 409.5
Sample D Male 247.1
Entorhinal cortex
nTPM: 285.7
Samples: 4

Max nTPM: 366.9
Min nTPM: 198.1
Sample A Female 239.2
Sample B Female 366.9
Sample C Male 338.7
Sample D Male 198.1
Ventral hippocampus
nTPM: 290.8
Samples: 4

Max nTPM: 308.3
Min nTPM: 270.9
Sample A Female 294.3
Sample B Female 270.9
Sample C Male 289.8
Sample D Male 308.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 663.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 612.0
Samples: 4

Max nTPM: 648.4
Min nTPM: 575.9
Sample A Male 602.4
Sample B Male 621.1
Sample C Female 648.4
Sample D Female 575.9
Hippocampal formation
nTPM: 663.6
Samples: 4

Max nTPM: 701.8
Min nTPM: 624.1
Sample A Male 700.7
Sample B Male 627.7
Sample C Female 624.1
Sample D Female 701.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.2
631721 Antisense, RP_040907_01_B12, Mouse strain C57BL/6J (56 days, male) 8.5
70928395 Antisense, RP_050808_02_A04, Mouse strain C57BL/6J (56 days, male) 2.0

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