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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:662.1 nTPM
HPA Brain:3295.1 nTPM
GTEx:662.1 nTPM
Pig:1661.9 nTPM
Mouse:2143.1 nTPM
Allen mouse:10.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3295.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 2008.1
1961 Female, age 42, unknown 2528.8
2226 Male, age 75, left hemisphere 1487.4
Dorsomedial nucleus
nTPM: 2139.0
2017 Female, age 42, unknown 2676.1
2041 Female, age 72, unknown 2087.6
1989 Male, age 62, unknown 1653.3
Lateral hypothalamic area
nTPM: 1850.7
1791 Male, age 80, right hemisphere 2455.3
2271 Male, age 75, both hemispheres 2003.3
2412 Male, age 62, unknown 1720.6
2228 Male, age 66, unknown 1223.8
Mammillary body
nTPM: 1687.3
1834 Female, age 42, unknown 2488.0
2413 Male, age 66, unknown 1690.2
1945 Male, age 80, right hemisphere 1681.8
1923 Female, age 72, unknown 1342.4
1948 Female, age 72, unknown 1234.1
Paraventricular nucleus
nTPM: 2030.5
2700 Male, age 62, unknown 2030.5
Preoptic area
nTPM: 1809.9
1861 Female, age 42, unknown 2085.8
2414 Female, age 72, unknown 1716.9
1907 Male, age 80, right hemisphere 1627.0
Supraoptic nucleus
nTPM: 3295.1
2043 Male, age 62, unknown 3870.6
1894 Female, age 72, unknown 3561.2
2835 Female, age 72, unknown 2453.3
Ventromedial nucleus
nTPM: 2334.0
1822 Female, age 42, unknown 2671.1
1982 Female, age 72, unknown 1996.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

662.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 662.1
Samples: 257

Max nTPM: 1932.4
Min nTPM: 49.4
Std nTPM: 296.6
Median nTPM: 601.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 1932.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 1767.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 1515.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 1511.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 1470.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 1460.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 1427.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 1413.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 1345.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 1333.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 1254.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 1213.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 1203.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 1195.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 1179.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 1172.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 1169.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 1165.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 1124.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 1118.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 1111.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 1111.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 1105.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 1068.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 1060.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 1049.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 1044.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 1033.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 1031.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 1019.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 1016.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 994.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 994.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 985.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 967.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 966.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 962.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 956.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 955.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 948.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 944.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 941.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 932.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 931.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 927.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 909.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 908.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 905.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 887.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 884.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 861.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 859.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 858.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 855.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 854.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 849.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 836.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 835.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 830.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 824.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 817.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 814.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 814.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 812.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 811.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 794.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 793.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 793.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 788.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 786.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 785.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 781.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 780.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 778.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 766.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 761.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 759.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 757.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 751.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 751.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 750.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 747.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 742.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 742.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 738.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 732.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 728.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 727.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 725.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 723.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 722.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 722.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 721.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 721.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 718.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 717.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 708.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 708.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 705.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 704.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 702.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 698.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 697.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 696.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 681.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 678.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 677.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 675.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 674.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 661.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 661.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 661.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 653.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 651.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 650.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 644.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 641.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 636.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 634.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 634.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 627.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 614.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 612.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 609.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 608.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 608.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 607.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 604.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 601.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 601.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 600.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 598.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 594.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 592.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 591.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 587.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 582.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 581.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 580.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 573.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 571.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 568.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 567.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 565.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 565.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 558.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 557.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 550.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 549.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 548.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 548.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 547.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 545.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 545.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 542.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 540.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 540.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 536.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 535.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 534.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 528.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 523.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 523.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 522.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 521.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 518.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 517.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 513.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 512.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 512.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 512.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 511.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 509.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 505.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 505.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 499.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 495.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 495.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 494.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 493.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 492.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 489.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 488.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 484.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 484.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 482.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 480.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 480.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 472.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 471.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 470.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 466.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 462.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 461.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 460.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 459.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 459.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 457.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 457.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 457.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 455.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 452.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 450.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 445.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 444.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 443.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 442.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 441.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 439.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 436.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 435.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 422.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 420.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 416.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 411.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 404.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 402.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 391.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 390.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 386.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 385.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 385.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 384.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 376.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 375.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 375.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 370.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 363.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 362.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 361.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 360.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 355.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 348.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 325.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 318.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 318.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 317.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 306.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 286.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 278.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 278.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 278.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 271.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 270.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 264.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 256.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 253.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 247.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 244.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 188.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 187.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 165.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 164.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 142.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 116.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 107.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 49.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1661.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 1661.9
Samples: 4

Max nTPM: 2177.1
Min nTPM: 1232.0
Sample A Female 2177.1
Sample B Female 1436.1
Sample C Male 1802.3
Sample D Male 1232.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2143.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 2143.1
Samples: 4

Max nTPM: 2376.9
Min nTPM: 1965.0
Sample A Male 1965.0
Sample B Male 2376.9
Sample C Female 2217.6
Sample D Female 2013.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 10.3
73512200 Antisense, RP_050712_04_F12, Mouse strain C57BL/6J (56 days, male) 11.0
73788443 Antisense, RP_051213_01_B02, Mouse strain C57BL/6J (56 days, male) 10.0
70429441 Antisense, RP_050614_01_F09, Mouse strain C57BL/6J (56 days, male) 9.8
70918880 Antisense, RP_050712_04_F12, Mouse strain C57BL/6J (56 days, male) 4.3

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