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  • TISSUE

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  • TMEM59
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:148.9 nTPM
HPA Brain:193.2 nTPM
GTEx:148.9 nTPM
Pig:177.9 nTPM
Mouse:125.4 nTPM
Allen mouse:18.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

193.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 174.9
2226 Male, age 75, left hemisphere 219.2
1961 Female, age 42, unknown 130.5
Dorsomedial nucleus
nTPM: 141.0
2041 Female, age 72, unknown 150.1
2017 Female, age 42, unknown 140.4
1989 Male, age 62, unknown 132.5
Lateral hypothalamic area
nTPM: 165.4
1791 Male, age 80, right hemisphere 195.4
2271 Male, age 75, both hemispheres 185.7
2228 Male, age 66, unknown 176.7
2412 Male, age 62, unknown 103.9
Mammillary body
nTPM: 187.3
1923 Female, age 72, unknown 204.5
1945 Male, age 80, right hemisphere 199.9
1948 Female, age 72, unknown 188.3
2413 Male, age 66, unknown 182.7
1834 Female, age 42, unknown 161.2
Paraventricular nucleus
nTPM: 139.1
2700 Male, age 62, unknown 139.1
Preoptic area
nTPM: 147.3
2414 Female, age 72, unknown 162.9
1907 Male, age 80, right hemisphere 145.1
1861 Female, age 42, unknown 133.7
Supraoptic nucleus
nTPM: 193.2
2043 Male, age 62, unknown 225.6
1894 Female, age 72, unknown 212.1
2835 Female, age 72, unknown 141.8
Ventromedial nucleus
nTPM: 121.8
1982 Female, age 72, unknown 129.3
1822 Female, age 42, unknown 114.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

148.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 148.9
Samples: 257

Max nTPM: 490.9
Min nTPM: 69.6
Std nTPM: 48.1
Median nTPM: 140.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 490.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 330.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 317.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 311.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 300.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 290.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 273.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 271.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 259.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 252.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 242.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 240.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 240.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 231.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 227.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 223.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 220.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 217.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 211.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 211.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 206.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 201.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 201.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 199.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 198.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 196.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 196.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 196.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 196.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 194.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 192.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 191.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 190.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 189.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 188.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 188.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 188.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 187.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 187.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 186.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 186.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 184.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 183.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 182.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 182.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 180.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 177.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 177.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 177.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 176.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 175.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 175.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 175.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 174.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 174.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 173.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 173.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 172.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 171.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 171.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 171.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 168.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 166.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 166.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 166.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 165.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 164.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 164.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 163.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 163.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 163.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 163.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 162.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 162.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 161.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 161.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 160.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 160.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 160.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 160.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 159.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 159.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 158.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 158.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 158.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 157.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 157.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 156.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 155.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 154.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 153.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 153.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 151.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 151.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 150.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 150.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 150.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 149.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 149.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 148.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 147.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 147.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 147.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 147.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 147.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 146.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 146.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 145.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 145.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 145.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 145.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 144.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 144.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 144.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 143.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 143.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 143.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 142.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 142.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 142.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 142.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 142.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 142.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 141.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 141.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 141.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 140.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 140.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 140.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 140.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 139.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 139.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 139.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 138.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 138.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 138.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 138.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 137.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 137.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 137.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 137.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 137.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 135.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 135.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 135.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 134.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 134.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 133.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 133.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 133.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 132.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 132.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 132.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 132.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 132.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 132.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 131.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 131.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 130.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 129.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 129.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 129.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 129.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 128.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 128.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 127.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 127.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 127.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 127.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 127.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 126.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 126.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 125.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 125.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 124.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 124.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 124.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 124.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 124.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 124.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 123.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 123.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 122.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 122.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 122.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 122.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 122.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 121.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 121.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 121.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 121.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 121.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 120.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 120.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 120.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 119.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 118.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 117.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 117.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 117.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 116.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 116.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 116.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 115.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 115.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 115.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 115.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 115.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 114.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 114.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 114.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 113.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 113.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 113.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 113.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 113.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 110.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 110.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 109.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 109.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 109.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 109.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 108.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 108.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 107.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 107.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 106.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 106.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 105.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 104.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 104.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 104.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 103.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 102.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 100.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 99.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 98.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 97.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 97.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 96.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 95.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 94.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 94.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 93.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 92.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 88.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 88.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 86.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 85.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 85.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 82.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 81.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 80.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 77.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 77.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 72.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 69.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

177.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 177.9
Samples: 4

Max nTPM: 211.1
Min nTPM: 140.7
Sample A Female 211.1
Sample B Female 184.5
Sample C Male 175.4
Sample D Male 140.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

125.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 125.4
Samples: 4

Max nTPM: 149.0
Min nTPM: 110.2
Sample A Male 129.3
Sample B Male 149.0
Sample C Female 113.0
Sample D Female 110.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

18.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 18.7
69015793 Antisense, RP_050315_01_G01, Mouse strain C57BL/6J (56 days, male) 18.7

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