A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
2.3
nTPM
Monaco:
247.4
nTPM
Schmiedel:
351.2
TPM
NK-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
2.3
HPA sample
nTPM
NK-cell nTPM: 2.3
Samples: 6
Max nTPM: 5.1
Min nTPM: 0.2
P10809_1013
2.0
P10809_1033
5.1
P10809_1052
3.0
P10809_1071
0.8
P10809_1093
0.2
P10809_1103
2.8
NK-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
247.4
Monaco sample
nTPM
NK-cell nTPM: 247.4
Samples: 4
Max nTPM: 537.8
Min nTPM: 130.2
RHH5316_R3683
181.7
RHH5224_R3596
537.8
RHH5253_R3625
139.8
RHH5282_R3654
130.2
NK-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
351.2
Schmiedel sample id
TPM
NK-cell TPM: 351.2
Samples: 90
Max TPM: 788.5
Min TPM: 103.3
NK_1
788.5
NK_2
665.2
NK_3
658.5
NK_4
587.5
NK_5
570.3
NK_6
559.7
NK_7
559.3
NK_8
555.3
NK_9
554.4
NK_10
537.1
NK_11
533.5
NK_12
526.9
NK_13
494.1
NK_14
491.5
NK_15
488.9
NK_16
486.7
NK_17
481.4
NK_18
478.7
NK_19
476.3
NK_20
475.7
NK_21
469.9
NK_22
465.4
NK_23
462.9
NK_24
458.2
NK_25
451.7
NK_26
446.5
NK_27
438.5
NK_28
438.4
NK_29
429.1
NK_30
428.1
NK_31
419.7
NK_32
402.8
NK_33
396.1
NK_34
392.9
NK_35
390.9
NK_36
389.9
NK_37
389.6
NK_38
362.4
NK_39
348.6
NK_40
344.2
NK_41
335.9
NK_42
331.7
NK_43
324.1
NK_44
313.9
NK_45
313.3
NK_46
304.6
NK_47
304.5
NK_48
303.7
NK_49
303.5
NK_50
303.2
NK_51
303.0
NK_52
300.4
NK_53
292.8
NK_54
290.5
NK_55
288.9
NK_56
281.0
NK_57
275.2
NK_58
273.0
NK_59
272.9
NK_60
270.7
NK_61
269.9
NK_62
266.9
NK_63
260.0
NK_64
256.8
NK_65
255.4
NK_66
252.0
NK_67
249.7
NK_68
248.9
NK_69
241.5
NK_70
241.5
NK_71
241.1
NK_72
237.4
NK_73
231.1
NK_74
228.8
NK_75
222.4
NK_76
214.0
NK_77
208.5
NK_78
208.0
NK_79
205.0
NK_80
195.4
NK_81
193.2
NK_82
191.1
NK_83
178.2
NK_84
175.4
NK_85
173.7
NK_86
166.7
NK_87
152.2
NK_88
141.9
NK_89
113.2
NK_90
103.3
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.