A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
426.3
nTPM
Monaco:
480.1
nTPM
Schmiedel:
248.1
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
426.3
HPA sample
nTPM
Classical monocyte nTPM: 426.3
Samples: 6
Max nTPM: 604.6
Min nTPM: 265.0
P10809_1003
388.6
P10809_1020
604.6
P10809_1039
602.6
P10809_1058
265.0
P10809_1080
315.5
P10809_1107
381.5
Intermediate monocyte nTPM: 409.1
Samples: 6
Max nTPM: 522.9
Min nTPM: 270.3
P10809_1004
326.2
P10809_1023
522.9
P10809_1042
470.9
P10809_1061
492.8
P10809_1081
270.3
P10809_1108
371.7
Non-classical monocyte nTPM: 358.1
Samples: 5
Max nTPM: 489.7
Min nTPM: 220.1
P10809_1005
307.1
P10809_1053
419.6
P10809_1072
489.7
P10809_1082
220.1
P10809_1109
354.0
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
480.1
Monaco sample
nTPM
Classical monocyte nTPM: 480.1
Samples: 4
Max nTPM: 587.7
Min nTPM: 392.7
RHH5313_R3680
457.1
RHH5221_R3593
587.7
RHH5250_R3622
482.7
RHH5279_R3651
392.7
Intermediate monocyte nTPM: 363.2
Samples: 4
Max nTPM: 396.9
Min nTPM: 341.9
RHH5314_R3681
353.1
RHH5222_R3594
396.9
RHH5251_R3623
360.7
RHH5280_R3652
341.9
Non-classical monocyte nTPM: 394.9
Samples: 4
Max nTPM: 430.0
Min nTPM: 317.8
RHH5315_R3682
407.8
RHH5223_R3595
430.0
RHH5252_R3624
423.9
RHH5281_R3653
317.8
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
248.1
Schmiedel sample id
TPM
Classical monocyte TPM: 248.1
Samples: 91
Max TPM: 287.9
Min TPM: 194.1
MONOCYTES_1
287.9
MONOCYTES_2
284.4
MONOCYTES_3
281.2
MONOCYTES_4
279.9
MONOCYTES_5
279.3
MONOCYTES_6
278.8
MONOCYTES_7
278.6
MONOCYTES_8
278.2
MONOCYTES_9
276.5
MONOCYTES_10
276.1
MONOCYTES_11
274.2
MONOCYTES_12
273.1
MONOCYTES_13
272.2
MONOCYTES_14
272.1
MONOCYTES_15
272.0
MONOCYTES_16
271.9
MONOCYTES_17
271.4
MONOCYTES_18
269.5
MONOCYTES_19
269.1
MONOCYTES_20
268.5
MONOCYTES_21
268.1
MONOCYTES_22
267.7
MONOCYTES_23
266.9
MONOCYTES_24
266.9
MONOCYTES_25
265.6
MONOCYTES_26
264.7
MONOCYTES_27
263.5
MONOCYTES_28
263.2
MONOCYTES_29
263.0
MONOCYTES_30
262.3
MONOCYTES_31
262.1
MONOCYTES_32
261.9
MONOCYTES_33
261.4
MONOCYTES_34
260.6
MONOCYTES_35
259.7
MONOCYTES_36
259.6
MONOCYTES_37
259.1
MONOCYTES_38
258.7
MONOCYTES_39
257.8
MONOCYTES_40
257.6
MONOCYTES_41
255.9
MONOCYTES_42
253.9
MONOCYTES_43
252.5
MONOCYTES_44
250.6
MONOCYTES_45
250.0
MONOCYTES_46
249.7
MONOCYTES_47
249.6
MONOCYTES_48
248.4
MONOCYTES_49
247.2
MONOCYTES_50
245.5
MONOCYTES_51
244.8
MONOCYTES_52
243.6
MONOCYTES_53
243.4
MONOCYTES_54
242.8
MONOCYTES_55
241.9
MONOCYTES_56
241.7
MONOCYTES_57
241.1
MONOCYTES_58
240.8
MONOCYTES_59
240.2
MONOCYTES_60
239.5
MONOCYTES_61
237.5
MONOCYTES_62
237.4
MONOCYTES_63
237.4
MONOCYTES_64
237.2
MONOCYTES_65
236.0
MONOCYTES_66
234.7
MONOCYTES_67
233.9
MONOCYTES_68
233.5
MONOCYTES_69
233.4
MONOCYTES_70
232.8
MONOCYTES_71
232.3
MONOCYTES_72
227.5
MONOCYTES_73
227.3
MONOCYTES_74
227.2
MONOCYTES_75
226.4
MONOCYTES_76
224.8
MONOCYTES_77
222.9
MONOCYTES_78
221.5
MONOCYTES_79
218.8
MONOCYTES_80
218.6
MONOCYTES_81
217.0
MONOCYTES_82
216.7
MONOCYTES_83
215.7
MONOCYTES_84
215.3
MONOCYTES_85
213.4
MONOCYTES_86
212.8
MONOCYTES_87
204.2
MONOCYTES_88
200.9
MONOCYTES_89
199.9
MONOCYTES_90
197.6
MONOCYTES_91
194.1
Show allShow less
Non-classical monocyte TPM: 208.5
Samples: 90
Max TPM: 259.9
Min TPM: 173.3
M2_1
259.9
M2_2
257.8
M2_3
255.3
M2_4
240.7
M2_5
237.2
M2_6
236.8
M2_7
235.6
M2_8
234.6
M2_9
234.0
M2_10
233.9
M2_11
232.4
M2_12
231.5
M2_13
227.6
M2_14
225.7
M2_15
224.9
M2_16
222.8
M2_17
222.4
M2_18
222.3
M2_19
221.8
M2_20
221.6
M2_21
221.5
M2_22
221.1
M2_23
220.7
M2_24
220.3
M2_25
219.3
M2_26
216.2
M2_27
216.1
M2_28
215.7
M2_29
215.5
M2_30
215.2
M2_31
214.1
M2_32
213.9
M2_33
213.8
M2_34
213.4
M2_35
213.3
M2_36
211.0
M2_37
210.7
M2_38
210.3
M2_39
210.0
M2_40
210.0
M2_41
209.4
M2_42
209.3
M2_43
208.8
M2_44
208.8
M2_45
208.1
M2_46
207.7
M2_47
207.4
M2_48
207.1
M2_49
206.7
M2_50
206.6
M2_51
206.3
M2_52
206.0
M2_53
206.0
M2_54
204.0
M2_55
203.7
M2_56
202.6
M2_57
201.5
M2_58
200.8
M2_59
200.6
M2_60
199.2
M2_61
198.7
M2_62
198.6
M2_63
198.4
M2_64
197.3
M2_65
196.6
M2_66
196.4
M2_67
195.7
M2_68
193.9
M2_69
192.6
M2_70
192.6
M2_71
192.2
M2_72
191.9
M2_73
191.3
M2_74
190.8
M2_75
190.1
M2_76
189.2
M2_77
188.8
M2_78
188.7
M2_79
188.2
M2_80
187.0
M2_81
186.8
M2_82
185.6
M2_83
185.5
M2_84
183.9
M2_85
182.8
M2_86
181.3
M2_87
181.1
M2_88
176.8
M2_89
173.9
M2_90
173.3
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.