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BETA
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  • RPL21
IMMUNE CELL B-CELLS Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
B-cells
Immune cell methods
B-CELLS - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:9631.7 nTPM
Monaco:2387.2 nTPM
Schmiedel:183.1 TPM

B-CELLS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

9631.7
HPA sample nTPM
Memory B-cell
nTPM: 9631.7
Samples: 6

Max nTPM: 11284.2
Min nTPM: 6400.9
P10809_1017 6400.9
P10809_1025 10486.3
P10809_1044 11284.2
P10809_1063 9972.2
P10809_1092 9488.8
P10809_1105 10158.1
Naive B-cell
nTPM: 8783.4
Samples: 6

Max nTPM: 9926.0
Min nTPM: 5695.3
P10809_1011 5695.3
P10809_1029 8760.8
P10809_1048 9926.0
P10809_1067 9743.7
P10809_1091 8682.8
P10809_1104 9891.7

B-CELLS - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

2387.2
Monaco sample nTPM
Exhausted memory B-cell
nTPM: 2387.2
Samples: 4

Max nTPM: 5210.7
Min nTPM: 616.8
RHH5310_R3677 1875.7
RHH5218_R3590 616.8
RHH5247_R3619 5210.7
RHH5276_R3648 1845.6
Naive B-cell
nTPM: 1972.9
Samples: 4

Max nTPM: 3213.4
Min nTPM: 1070.8
RHH5308_R3675 2096.2
RHH5216_R3588 1070.8
RHH5245_R3617 3213.4
RHH5274_R3646 1511.0
Non-switched memory B-cell
nTPM: 1630.9
Samples: 4

Max nTPM: 2208.0
Min nTPM: 932.5
RHH5309_R3676 1965.3
RHH5217_R3589 932.5
RHH5246_R3618 1417.9
RHH5275_R3647 2208.0
Plasmablast
nTPM: 1037.2
Samples: 4

Max nTPM: 1209.9
Min nTPM: 678.0
RHH5312_R3679 1209.9
RHH5220_R3592 678.0
RHH5249_R3621 1207.3
RHH5278_R3650 1053.7
Switched memory B-cell
nTPM: 1456.5
Samples: 4

Max nTPM: 1970.7
Min nTPM: 913.4
RHH5311_R3678 1970.7
RHH5219_R3591 1214.5
RHH5248_R3620 913.4
RHH5277_R3649 1727.3

B-CELLS - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

183.1
Schmiedel sample id TPM
Naive B-cell
TPM: 183.1
Samples: 91

Max TPM: 244.1
Min TPM: 106.5
B_CELL_NAIVE_1 244.1
B_CELL_NAIVE_2 230.3
B_CELL_NAIVE_3 228.5
B_CELL_NAIVE_4 222.2
B_CELL_NAIVE_5 220.1
B_CELL_NAIVE_6 216.9
B_CELL_NAIVE_7 216.4
B_CELL_NAIVE_8 216.3
B_CELL_NAIVE_9 215.9
B_CELL_NAIVE_10 212.0
B_CELL_NAIVE_11 211.9
B_CELL_NAIVE_12 211.5
B_CELL_NAIVE_13 211.2
B_CELL_NAIVE_14 210.9
B_CELL_NAIVE_15 210.2
B_CELL_NAIVE_16 210.2
B_CELL_NAIVE_17 209.3
B_CELL_NAIVE_18 204.4
B_CELL_NAIVE_19 204.1
B_CELL_NAIVE_20 202.5
B_CELL_NAIVE_21 200.9
B_CELL_NAIVE_22 200.7
B_CELL_NAIVE_23 200.3
B_CELL_NAIVE_24 200.3
B_CELL_NAIVE_25 198.9
B_CELL_NAIVE_26 198.5
B_CELL_NAIVE_27 196.3
B_CELL_NAIVE_28 196.2
B_CELL_NAIVE_29 196.0
B_CELL_NAIVE_30 194.5
B_CELL_NAIVE_31 193.2
B_CELL_NAIVE_32 191.9
B_CELL_NAIVE_33 191.7
B_CELL_NAIVE_34 191.6
B_CELL_NAIVE_35 189.0
B_CELL_NAIVE_36 188.4
B_CELL_NAIVE_37 187.9
B_CELL_NAIVE_38 187.8
B_CELL_NAIVE_39 186.9
B_CELL_NAIVE_40 186.5
B_CELL_NAIVE_41 184.9
B_CELL_NAIVE_42 184.9
B_CELL_NAIVE_43 184.4
B_CELL_NAIVE_44 184.0
B_CELL_NAIVE_45 182.6
B_CELL_NAIVE_46 181.6
B_CELL_NAIVE_47 180.8
B_CELL_NAIVE_48 180.0
B_CELL_NAIVE_49 179.6
B_CELL_NAIVE_50 179.3
B_CELL_NAIVE_51 179.2
B_CELL_NAIVE_52 178.9
B_CELL_NAIVE_53 178.7
B_CELL_NAIVE_54 177.9
B_CELL_NAIVE_55 177.8
B_CELL_NAIVE_56 177.6
B_CELL_NAIVE_57 176.8
B_CELL_NAIVE_58 176.8
B_CELL_NAIVE_59 176.7
B_CELL_NAIVE_60 175.6
B_CELL_NAIVE_61 174.4
B_CELL_NAIVE_62 174.3
B_CELL_NAIVE_63 172.5
B_CELL_NAIVE_64 171.7
B_CELL_NAIVE_65 170.0
B_CELL_NAIVE_66 169.0
B_CELL_NAIVE_67 168.7
B_CELL_NAIVE_68 168.3
B_CELL_NAIVE_69 168.2
B_CELL_NAIVE_70 166.2
B_CELL_NAIVE_71 165.4
B_CELL_NAIVE_72 164.2
B_CELL_NAIVE_73 163.9
B_CELL_NAIVE_74 163.1
B_CELL_NAIVE_75 162.1
B_CELL_NAIVE_76 161.0
B_CELL_NAIVE_77 160.5
B_CELL_NAIVE_78 160.1
B_CELL_NAIVE_79 159.6
B_CELL_NAIVE_80 159.6
B_CELL_NAIVE_81 157.8
B_CELL_NAIVE_82 157.2
B_CELL_NAIVE_83 152.6
B_CELL_NAIVE_84 151.4
B_CELL_NAIVE_85 149.0
B_CELL_NAIVE_86 145.2
B_CELL_NAIVE_87 144.4
B_CELL_NAIVE_88 143.1
B_CELL_NAIVE_89 131.6
B_CELL_NAIVE_90 116.8
B_CELL_NAIVE_91 106.5
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