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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Follicle cells: Medium
Ovarian stroma cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:3124.3 nTPM
HPA:2981.0 nTPM
GTEx:3124.3 nTPM
FANTOM5:3752.1 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA043717
Follicle cells Medium
Ovarian stroma cells Not detected



OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2981.0
overview
Female, age 64
Ovary sample 192
nTPM: 2690
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 3550.3
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 3176.1
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 2327.9
N/A
Female, age 16
Ovary sample 3663
nTPM: 4737.6
N/A
Female, age 20
Ovary sample 3664
nTPM: 2547.3
N/A
Female, age 32
Ovary sample 3665
nTPM: 1837.6

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3124.3
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 3124.3
Samples: 193

Max nTPM: 7682.6
Min nTPM: 1168.8
Std nTPM: 1099.2
Median nTPM: 2884.7
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 7682.6
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 6496.2
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 6415.4
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 5953.5
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 5562.7
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 5561.8
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 5392.7
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 5360.2
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 5329.0
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 5312.2
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 5194.7
GTEX-183WM-1926-SM-72D5F 70-79 years, female 5103.7
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 5025.5
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 4939.4
GTEX-QVJO-3126-SM-COH22 60-69 years, female 4908.1
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 4869.6
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 4777.0
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 4747.9
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 4745.4
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 4592.0
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 4566.4
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 4527.6
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 4501.2
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 4466.0
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 4395.7
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 4224.6
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 4209.9
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 4174.4
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 4171.9
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 4154.5
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 4105.4
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 4104.9
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 4083.1
GTEX-RU72-2226-SM-46MUE 50-59 years, female 4074.9
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 4059.8
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 4055.5
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 4028.8
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 4027.0
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 3975.5
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 3931.1
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 3911.4
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 3901.2
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 3846.7
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 3833.3
GTEX-13SLX-2426-SM-664OM 50-59 years, female 3826.8
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 3774.6
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 3771.7
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 3764.6
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 3758.9
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 3748.1
GTEX-15EOM-1526-SM-68723 20-29 years, female 3739.6
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 3736.8
GTEX-14BIN-1426-SM-664NI 50-59 years, female 3726.6
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 3653.8
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 3640.5
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 3611.8
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 3600.1
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 3585.1
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 3582.3
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 3570.6
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 3495.5
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 3444.6
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 3438.0
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 3428.0
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 3396.9
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 3363.5
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 3359.0
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 3328.4
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 3304.1
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 3280.9
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 3278.4
GTEX-11I78-1926-SM-59878 50-59 years, female 3277.8
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 3261.3
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 3246.4
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 3241.2
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 3211.8
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 3203.7
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 3164.5
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 3153.1
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 3140.3
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 3133.9
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 3133.8
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 3121.2
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 3117.3
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 3078.0
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 3065.0
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 3063.1
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 3050.4
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 3008.2
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 2993.4
GTEX-R45C-2526-SM-GRR28 60-69 years, female 2978.9
GTEX-S32W-1226-SM-4AD67 50-59 years, female 2964.3
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 2963.1
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 2949.9
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 2924.8
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 2902.5
GTEX-145ME-1226-SM-5MR87 40-49 years, female 2884.7
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 2883.2
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 2880.9
GTEX-14PKV-1226-SM-6871T 20-29 years, female 2849.2
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 2848.5
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 2845.1
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 2830.0
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 2815.6
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 2808.6
GTEX-S341-0726-SM-4AD5R 40-49 years, female 2801.7
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 2782.4
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 2770.8
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 2758.6
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 2755.9
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 2746.7
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 2745.5
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 2737.8
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 2733.4
GTEX-P78B-1926-SM-3P616 40-49 years, female 2732.1
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 2731.1
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 2712.8
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 2705.3
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 2672.3
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 2670.8
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 2657.3
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 2657.0
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 2655.5
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 2654.4
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 2638.8
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 2625.9
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 2621.1
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 2619.2
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 2605.4
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 2602.0
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 2584.2
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 2579.7
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 2561.1
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 2555.4
GTEX-18D9A-0826-SM-718C1 30-39 years, female 2552.6
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 2526.9
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 2515.1
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 2466.1
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 2460.6
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 2439.9
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 2437.7
GTEX-QCQG-1426-SM-48U22 50-59 years, female 2421.0
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 2408.3
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 2400.6
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 2397.9
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 2386.5
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 2346.1
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 2317.5
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 2292.6
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 2292.4
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 2291.6
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 2291.1
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 2280.6
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 2258.4
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 2227.7
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 2221.3
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 2175.8
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 2175.2
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 2171.7
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 2155.7
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 2122.5
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 2105.2
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 2064.2
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 2038.5
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 2024.1
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 2006.1
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 1992.7
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 1987.8
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 1963.4
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 1940.8
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 1919.8
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 1882.3
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 1871.8
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 1858.3
GTEX-Q734-0726-SM-48TZP 40-49 years, female 1821.1
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 1819.2
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 1795.1
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 1792.7
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 1766.8
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 1759.8
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 1743.8
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 1697.6
GTEX-14JG6-0626-SM-68716 30-39 years, female 1630.0
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 1629.6
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 1609.0
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 1576.7
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 1566.7
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 1524.2
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 1493.0
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 1284.8
GTEX-R55G-1526-SM-48FER 40-49 years, female 1247.9
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 1194.6
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 1168.8
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

3752.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 3752.1
FF:10020-101D2 47,75,84 years, female 3752.1

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