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  • TISSUE

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  • PFDN5
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:712.8 nTPM
HPA Brain:239.4 nTPM
GTEx:712.8 nTPM
Pig:53.7 nTPM
Mouse:301.6 nTPM
Allen mouse:5.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

239.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 197.1
1961 Female, age 42, unknown 216.6
2226 Male, age 75, left hemisphere 177.6
Dorsomedial nucleus
nTPM: 197.6
2041 Female, age 72, unknown 211.9
1989 Male, age 62, unknown 195.3
2017 Female, age 42, unknown 185.6
Lateral hypothalamic area
nTPM: 221.4
2228 Male, age 66, unknown 229.5
1791 Male, age 80, right hemisphere 222.9
2271 Male, age 75, both hemispheres 217.4
2412 Male, age 62, unknown 215.7
Mammillary body
nTPM: 209.0
1945 Male, age 80, right hemisphere 223.1
1948 Female, age 72, unknown 219.4
1923 Female, age 72, unknown 213.3
1834 Female, age 42, unknown 198.1
2413 Male, age 66, unknown 191.1
Paraventricular nucleus
nTPM: 230.7
2700 Male, age 62, unknown 230.7
Preoptic area
nTPM: 203.0
1861 Female, age 42, unknown 226.5
2414 Female, age 72, unknown 197.8
1907 Male, age 80, right hemisphere 184.8
Supraoptic nucleus
nTPM: 239.4
1894 Female, age 72, unknown 267.9
2043 Male, age 62, unknown 227.9
2835 Female, age 72, unknown 222.3
Ventromedial nucleus
nTPM: 214.0
1982 Female, age 72, unknown 231.0
1822 Female, age 42, unknown 196.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

712.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 712.8
Samples: 257

Max nTPM: 2476.2
Min nTPM: 284.9
Std nTPM: 286.2
Median nTPM: 637.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 2476.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 2058.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 1940.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 1830.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 1744.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 1668.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 1666.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 1630.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 1480.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 1386.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 1284.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 1202.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 1190.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 1181.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 1166.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 1165.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 1160.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 1134.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 1133.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 1096.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 1089.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 1082.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 1081.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 1020.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 1018.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 1004.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 996.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 983.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 982.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 976.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 973.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 957.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 956.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 941.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 935.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 928.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 925.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 924.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 923.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 904.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 895.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 885.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 884.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 881.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 861.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 834.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 828.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 824.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 815.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 814.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 812.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 806.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 806.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 804.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 801.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 798.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 795.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 786.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 784.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 783.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 779.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 777.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 774.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 769.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 767.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 767.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 767.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 767.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 763.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 761.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 756.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 755.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 754.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 751.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 750.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 749.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 738.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 736.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 733.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 733.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 733.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 728.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 728.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 726.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 725.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 720.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 719.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 715.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 713.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 710.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 707.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 701.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 697.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 695.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 695.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 693.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 693.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 692.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 690.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 684.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 683.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 681.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 677.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 675.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 675.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 675.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 673.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 672.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 672.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 670.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 668.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 666.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 665.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 664.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 662.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 660.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 658.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 657.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 655.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 654.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 652.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 650.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 650.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 649.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 646.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 642.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 642.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 640.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 637.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 636.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 634.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 633.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 631.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 624.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 623.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 623.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 622.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 622.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 622.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 622.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 621.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 620.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 619.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 619.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 619.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 617.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 616.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 616.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 615.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 614.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 612.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 610.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 607.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 606.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 606.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 604.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 602.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 602.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 601.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 599.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 598.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 598.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 596.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 596.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 596.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 594.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 591.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 590.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 589.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 589.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 588.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 586.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 586.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 585.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 583.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 583.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 581.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 580.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 579.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 578.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 578.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 576.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 576.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 573.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 572.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 572.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 567.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 567.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 567.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 565.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 563.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 560.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 557.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 552.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 552.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 551.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 549.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 547.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 547.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 540.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 539.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 539.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 536.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 534.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 532.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 529.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 528.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 524.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 523.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 521.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 520.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 519.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 513.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 512.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 510.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 510.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 509.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 507.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 505.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 504.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 502.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 500.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 499.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 498.7
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 493.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 491.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 486.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 485.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 483.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 482.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 481.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 479.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 477.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 475.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 469.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 469.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 460.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 458.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 457.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 456.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 444.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 441.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 440.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 439.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 438.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 434.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 430.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 428.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 421.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 408.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 398.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 379.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 376.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 373.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 340.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 304.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 284.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

53.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 53.7
Samples: 4

Max nTPM: 75.8
Min nTPM: 36.7
Sample A Female 75.8
Sample B Female 52.1
Sample C Male 50.1
Sample D Male 36.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

301.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 301.6
Samples: 4

Max nTPM: 365.0
Min nTPM: 276.4
Sample A Male 282.1
Sample B Male 365.0
Sample C Female 283.0
Sample D Female 276.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 5.4
68498271 Antisense, RP_050113_01_F04, Mouse strain C57BL/6J (56 days, male) 5.4

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