HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:75.8 nTPM
HPA Brain:46.1 nTPM
GTEx:75.8 nTPM
FANTOM5:27.8 Scaled Tags Per Million
Pig:57.1 nTPM
Mouse:42.6 nTPM
Allen mouse:10.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055490Antibody CAB034338
Glial cells MediumHigh
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 46.1
Sample id Sample description nTPM
Hippocampus
nTPM: 42.7
1898 Male, age 80, left hemisphere 50.6
2621 Female, age 67, right hemisphere 48.8
1911 Female, age 85, right hemisphere 41.8
1855 Male, age 76, left hemisphere 41.6
2529 Female, age 94, left hemisphere 39.9
2148 Female, age 91, left hemisphere 33.2
Dentate gyrus
nTPM: 42.4
2010 Male, age 76, both hemispheres 46.1
1927 Female, age 91, both hemispheres 46.0
2246 Female, age 85, both hemispheres 41.4
2531 Female, age 67, both hemispheres 41.3
2530 Female, age 94, left hemisphere 40.9
2528 Male, age 74, both hemispheres 38.7
Entorhinal gyrus
nTPM: 42.7
1938 Female, age 85, left hemisphere 46.9
1787 Male, age 76, left hemisphere 46.4
2764 Male, age 80, right hemisphere 42.5
2613 Female, age 94, left hemisphere 41.3
2117 Female, age 91, right hemisphere 40.5
2686 Male, age 75, right hemisphere 38.5
Hippocampus, CA1
nTPM: 45.4
2749 Male, age 80, left hemisphere 52.2
2045 Male, age 76, both hemispheres 46.7
1873 Female, age 85, both hemispheres 46.4
2527 Male, age 74, both hemispheres 44.4
2082 Female, age 91, right hemisphere 37.1
Hippocampus, CA2
nTPM: 43.0
1892 Male, age 76, both hemispheres 49.6
2249 Male, age 74, both hemispheres 47.5
1940 Female, age 85, left hemisphere 42.0
2113 Female, age 91, right hemisphere 40.4
2437 Female, age 94, left hemisphere 39.8
1963 Male, age 80, left hemisphere 38.5
Hippocampus, CA3
nTPM: 45.7
2436 Male, age 74, both hemispheres 50.0
1867 Male, age 76, both hemispheres 48.7
2137 Male, age 80, left hemisphere 45.9
2620 Female, age 94, left hemisphere 44.7
2861 Female, age 67, both hemispheres 43.6
1891 Female, age 85, both hemispheres 41.0
Parahippocampal cortex
nTPM: 42.4
2532 Female, age 72, left hemisphere 45.5
2018 Male, age 76, both hemispheres 45.2
2250 Female, age 67, right hemisphere 44.0
1933 Female, age 85, both hemispheres 43.9
2245 Female, age 91, both hemispheres 43.8
1850 Male, age 80, both hemispheres 43.6
2693 Female, age 94, both hemispheres 41.8
1990 Female, age 91, right hemisphere 40.6
2692 Male, age 74, both hemispheres 39.7
2622 Female, age 67, right hemisphere 36.2
Perirhinal gyrus
nTPM: 46.1
1794 Male, age 80, right hemisphere 49.0
1847 Female, age 91, left hemisphere 48.6
2848 Male, age 76, right hemisphere 46.9
1841 Female, age 85, right hemisphere 44.3
2521 Female, age 94, right hemisphere 41.9
Subiculum
nTPM: 43.3
2042 Male, age 76, both hemispheres 48.8
1977 Female, age 85, both hemispheres 46.8
1901 Male, age 80, both hemispheres 44.3
2619 Male, age 74, both hemispheres 41.9
2438 Female, age 94, left hemisphere 39.7
2729 Female, age 91, right hemisphere 38.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 75.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 75.8
Samples: 255

Max nTPM: 165.4
Min nTPM: 48.2
Std nTPM: 16.7
Median nTPM: 73.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 165.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 130.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 129.1
GTEX-ZZPT-0011-R1b-SM-GNINL 50-59 years, male 128.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 126.6
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 121.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 119.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 118.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 118.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 115.6
GTEX-12WSA-0011-R1b-SM-GI4VI 60-69 years, male 112.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 27.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.8
FF:10169-103B7 60 years, female 28.0
FF:10153-102I9 76 years, female 27.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 57.1
Pig sample Sample description nTPM
Subiculum
nTPM: 45.9
Samples: 4

Max nTPM: 54.3
Min nTPM: 42.4
Sample A Female 54.3
Sample B Female 42.9
Sample C Male 44.1
Sample D Male 42.4
Dorsal hippocampus
nTPM: 57.1
Samples: 4

Max nTPM: 72.5
Min nTPM: 49.0
Sample A Female 72.5
Sample B Female 49.0
Sample C Male 57.6
Sample D Male 49.4
Entorhinal cortex
nTPM: 44.7
Samples: 4

Max nTPM: 49.1
Min nTPM: 39.7
Sample A Female 49.1
Sample B Female 48.1
Sample C Male 39.7
Sample D Male 41.9
Ventral hippocampus
nTPM: 48.2
Samples: 4

Max nTPM: 52.7
Min nTPM: 41.4
Sample A Female 52.7
Sample B Female 41.4
Sample C Male 48.8
Sample D Male 50.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 42.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.9
Samples: 4

Max nTPM: 44.5
Min nTPM: 34.8
Sample A Male 39.1
Sample B Male 44.5
Sample C Female 41.3
Sample D Female 34.8
Hippocampal formation
nTPM: 42.6
Samples: 4

Max nTPM: 46.9
Min nTPM: 39.2
Sample A Male 43.9
Sample B Male 40.5
Sample C Female 39.2
Sample D Female 46.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 10.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.7
69079981 Antisense, RP_050324_01_A08, Mouse strain C57BL/6J (56 days, male) 10.7

Contact

The Project

The Human Protein Atlas

KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo