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  • TISSUE

  • BRAIN

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:69.8 nTPM
HPA Brain:50.4 nTPM
GTEx:69.8 nTPM
Pig:48.7 nTPM
Mouse:27.3 nTPM
Allen mouse:5.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

50.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 48.2
2226 Male, age 75, left hemisphere 54.8
1961 Female, age 42, unknown 41.7
Dorsomedial nucleus
nTPM: 41.5
2041 Female, age 72, unknown 47.7
1989 Male, age 62, unknown 38.4
2017 Female, age 42, unknown 38.4
Lateral hypothalamic area
nTPM: 50.3
1791 Male, age 80, right hemisphere 57.6
2228 Male, age 66, unknown 53.9
2271 Male, age 75, both hemispheres 52.6
2412 Male, age 62, unknown 37.2
Mammillary body
nTPM: 48.1
1923 Female, age 72, unknown 52.9
1945 Male, age 80, right hemisphere 48.7
1948 Female, age 72, unknown 48.5
2413 Male, age 66, unknown 46.0
1834 Female, age 42, unknown 44.5
Paraventricular nucleus
nTPM: 41.0
2700 Male, age 62, unknown 41.0
Preoptic area
nTPM: 42.1
1907 Male, age 80, right hemisphere 44.5
2414 Female, age 72, unknown 42.6
1861 Female, age 42, unknown 39.2
Supraoptic nucleus
nTPM: 50.4
2043 Male, age 62, unknown 53.2
1894 Female, age 72, unknown 52.7
2835 Female, age 72, unknown 45.4
Ventromedial nucleus
nTPM: 47.2
1982 Female, age 72, unknown 50.3
1822 Female, age 42, unknown 44.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

69.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 69.8
Samples: 257

Max nTPM: 154.2
Min nTPM: 40.8
Std nTPM: 12.8
Median nTPM: 68.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 154.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 118.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 117.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 110.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 109.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 106.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 104.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 100.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 99.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 95.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 94.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 92.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 92.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 91.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 90.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 88.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 85.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 85.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 85.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 84.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 84.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 84.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 84.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 84.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 84.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 83.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 82.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 82.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 82.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 82.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 81.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 81.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 81.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 81.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 80.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 80.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 80.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 80.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 80.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 80.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 80.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 79.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 79.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 79.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 79.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 79.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 79.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 78.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 78.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 78.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 78.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 78.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 78.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 77.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 77.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 77.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 77.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 76.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 76.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 76.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 75.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 75.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 75.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 75.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 75.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 75.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 75.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 74.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 74.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 74.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 74.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 74.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 74.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 74.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 73.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 73.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 73.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 73.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 73.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 73.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 73.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 72.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 72.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 72.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 72.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 72.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 72.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 71.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 71.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 71.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 71.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 71.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 71.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 71.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 71.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 71.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 70.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 70.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 70.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 70.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 70.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 70.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 70.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 70.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 70.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 70.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 70.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 70.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 69.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 69.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 69.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 69.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 69.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 69.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 69.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 69.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 69.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 69.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 69.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 68.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 68.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 68.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 68.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 68.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 68.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 68.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 68.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 68.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 68.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 68.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 68.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 68.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 68.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 67.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 67.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 67.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 67.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 67.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 67.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 66.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 66.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 66.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 66.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 66.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 66.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 66.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 66.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 66.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 66.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 66.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 65.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 65.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 65.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 65.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 65.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 65.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 65.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 65.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 65.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 65.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 65.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 65.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 65.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 64.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 64.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 64.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 64.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 64.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 64.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 64.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 63.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 63.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 63.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 63.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 63.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 63.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 63.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 63.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 63.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 63.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 63.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 63.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 62.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 62.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 62.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 62.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 62.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 62.3
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 62.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 62.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 62.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 62.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 62.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 62.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 62.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 61.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 61.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 61.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 61.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 61.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 61.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 61.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 61.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 61.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 60.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 60.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 60.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 60.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 60.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 59.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 59.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 59.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 59.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 59.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 59.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 59.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 59.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 59.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 58.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 58.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 58.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 58.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 58.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 58.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 58.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 57.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 57.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 57.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 57.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 57.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 57.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 56.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 56.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 56.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 55.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 55.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 55.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 55.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 55.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 54.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 54.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 54.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 54.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 54.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 53.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 53.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 52.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 52.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 52.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 52.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 51.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 51.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 50.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 50.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 44.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 42.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 40.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

48.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 48.7
Samples: 4

Max nTPM: 58.0
Min nTPM: 39.1
Sample A Female 58.0
Sample B Female 50.5
Sample C Male 47.2
Sample D Male 39.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

27.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 27.3
Samples: 4

Max nTPM: 31.0
Min nTPM: 23.9
Sample A Male 27.5
Sample B Male 31.0
Sample C Female 23.9
Sample D Female 26.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 5.2
69079981 Antisense, RP_050324_01_A08, Mouse strain C57BL/6J (56 days, male) 5.2

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