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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

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  • CELL LINE

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  • EVOLUTION

  • RPS10
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:309.3 nTPM
GTEx:945.6 nTPM
FANTOM5:226.2 Scaled Tags Per Million
Pig:371.3 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

309.3
Sample id Sample description nTPM
Putamen
nTPM: 309.3
2466 Female, age 79, unknown 387.2
2482 Female, age 94, left hemisphere 366.7
2647 Male, age 75, left hemisphere 320.1
1937 Female, age 91, right hemisphere 310.3
2489 Female, age 72, unknown 295.4
1838 Male, age 80, right hemisphere 281.5
1829 Male, age 74, unknown 203.9

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

945.6
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 945.6
Samples: 254

Max nTPM: 2769.2
Min nTPM: 451.8
Std nTPM: 329.7
Median nTPM: 855.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 2769.2
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 2459.9
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 2010.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1977.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1976.9
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 1782.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1729.6
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 1713.3
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 1687.7
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 1676.1
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 1606.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1595.7
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 1550.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1511.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1501.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1438.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1435.5
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 1423.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1416.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1412.7
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 1411.6
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 1405.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1368.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1356.8
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 1354.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1351.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1347.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1339.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1333.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1329.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1325.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1322.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1320.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1318.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1316.4
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 1313.8
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 1309.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1290.5
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 1276.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1269.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1255.7
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 1240.2
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 1237.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1230.6
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 1221.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1206.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1206.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1198.1
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 1189.8
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 1185.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 1177.2
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 1174.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1168.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1125.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 1118.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1117.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 1114.8
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 1112.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1110.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1108.9
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 1108.9
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 1104.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1100.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1093.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 1085.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1085.1
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 1083.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1081.7
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 1081.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1077.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1072.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1062.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1057.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1057.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1057.1
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 1054.3
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 1038.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 1021.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 1020.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1010.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1010.1
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 1000.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 987.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 981.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 980.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 980.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 977.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 970.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 962.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 962.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 955.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 952.0
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 945.5
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 942.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 941.9
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 937.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 934.9
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 934.0
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 926.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 921.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 916.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 914.7
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 912.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 911.3
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 911.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 908.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 906.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 901.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 901.0
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 900.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 898.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 895.1
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 893.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 893.0
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 891.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 885.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 884.8
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 884.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 883.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 882.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 881.7
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 881.4
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 880.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 874.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 860.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 860.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 856.9
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 853.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 849.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 849.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 849.1
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 849.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 846.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 844.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 844.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 842.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 842.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 841.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 839.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 836.6
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 832.5
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 830.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 828.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 827.5
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 826.4
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 825.7
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 825.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 823.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 823.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 821.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 819.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 816.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 816.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 815.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 814.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 814.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 811.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 806.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 805.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 803.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 803.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 802.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 802.5
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 799.3
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 797.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 796.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 794.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 794.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 793.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 791.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 789.4
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 787.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 786.9
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 785.0
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 781.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 781.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 769.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 766.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 761.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 760.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 759.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 758.8
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 752.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 750.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 749.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 747.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 746.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 734.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 734.4
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 733.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 732.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 731.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 731.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 727.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 724.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 718.7
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 715.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 715.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 715.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 713.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 705.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 701.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 696.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 695.3
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 694.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 693.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 690.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 684.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 682.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 679.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 678.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 672.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 666.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 663.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 663.0
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 660.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 660.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 658.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 656.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 650.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 643.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 638.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 632.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 627.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 611.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 611.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 610.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 610.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 606.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 604.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 598.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 597.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 591.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 588.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 585.6
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 583.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 576.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 575.7
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 574.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 567.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 557.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 556.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 555.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 551.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 542.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 539.3
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 537.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 525.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 518.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 507.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 504.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 494.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 457.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 451.8
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

226.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 226.2
FF:10176-103C5 60 years, female 226.2

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

371.3
Pig sample Sample description nTPM
Putamen
nTPM: 371.3
Samples: 3

Max nTPM: 447.2
Min nTPM: 284.8
Sample B Female 284.8
Sample C Male 447.2
Sample D Male 381.9

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