RPL23
HPA
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BETA
  • SUMMARY

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  • BRAIN

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  • RPL23
IMMUNE CELL B-CELLS Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
B-cells
Immune cell methods
B-CELLS - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:2383.5 nTPM
Monaco:649.0 nTPM
Schmiedel:430.3 TPM

B-CELLS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

2383.5
HPA sample nTPM
Memory B-cell
nTPM: 2383.5
Samples: 6

Max nTPM: 2910.1
Min nTPM: 2025.5
P10809_1017 2910.1
P10809_1025 2312.9
P10809_1044 2146.3
P10809_1063 2421.3
P10809_1092 2025.5
P10809_1105 2484.8
Naive B-cell
nTPM: 2169.1
Samples: 6

Max nTPM: 2413.3
Min nTPM: 1868.6
P10809_1011 2413.3
P10809_1029 1868.6
P10809_1048 2223.6
P10809_1067 2229.5
P10809_1091 1899.2
P10809_1104 2380.4

B-CELLS - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

649.0
Monaco sample nTPM
Exhausted memory B-cell
nTPM: 649.0
Samples: 4

Max nTPM: 1082.6
Min nTPM: 152.7
RHH5310_R3677 506.1
RHH5218_R3590 152.7
RHH5247_R3619 1082.6
RHH5276_R3648 854.5
Naive B-cell
nTPM: 632.6
Samples: 4

Max nTPM: 1179.9
Min nTPM: 269.6
RHH5308_R3675 576.1
RHH5216_R3588 269.6
RHH5245_R3617 1179.9
RHH5274_R3646 504.6
Non-switched memory B-cell
nTPM: 483.9
Samples: 4

Max nTPM: 933.4
Min nTPM: 186.7
RHH5309_R3676 579.8
RHH5217_R3589 235.6
RHH5246_R3618 186.7
RHH5275_R3647 933.4
Plasmablast
nTPM: 430.0
Samples: 4

Max nTPM: 568.5
Min nTPM: 275.0
RHH5312_R3679 482.2
RHH5220_R3592 275.0
RHH5249_R3621 394.4
RHH5278_R3650 568.5
Switched memory B-cell
nTPM: 408.8
Samples: 4

Max nTPM: 611.9
Min nTPM: 257.0
RHH5311_R3678 447.9
RHH5219_R3591 318.3
RHH5248_R3620 257.0
RHH5277_R3649 611.9

B-CELLS - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

430.3
Schmiedel sample id TPM
Naive B-cell
TPM: 430.3
Samples: 91

Max TPM: 536.8
Min TPM: 312.2
B_CELL_NAIVE_1 536.8
B_CELL_NAIVE_2 517.1
B_CELL_NAIVE_3 502.2
B_CELL_NAIVE_4 499.8
B_CELL_NAIVE_5 499.6
B_CELL_NAIVE_6 494.8
B_CELL_NAIVE_7 489.9
B_CELL_NAIVE_8 482.5
B_CELL_NAIVE_9 482.0
B_CELL_NAIVE_10 481.9
B_CELL_NAIVE_11 480.7
B_CELL_NAIVE_12 477.3
B_CELL_NAIVE_13 476.1
B_CELL_NAIVE_14 472.9
B_CELL_NAIVE_15 472.0
B_CELL_NAIVE_16 469.6
B_CELL_NAIVE_17 467.4
B_CELL_NAIVE_18 466.3
B_CELL_NAIVE_19 462.3
B_CELL_NAIVE_20 461.4
B_CELL_NAIVE_21 460.7
B_CELL_NAIVE_22 460.3
B_CELL_NAIVE_23 458.6
B_CELL_NAIVE_24 455.6
B_CELL_NAIVE_25 455.2
B_CELL_NAIVE_26 454.9
B_CELL_NAIVE_27 452.9
B_CELL_NAIVE_28 452.4
B_CELL_NAIVE_29 449.0
B_CELL_NAIVE_30 448.9
B_CELL_NAIVE_31 448.4
B_CELL_NAIVE_32 448.1
B_CELL_NAIVE_33 446.7
B_CELL_NAIVE_34 442.5
B_CELL_NAIVE_35 441.7
B_CELL_NAIVE_36 440.2
B_CELL_NAIVE_37 439.7
B_CELL_NAIVE_38 439.7
B_CELL_NAIVE_39 438.5
B_CELL_NAIVE_40 436.3
B_CELL_NAIVE_41 436.2
B_CELL_NAIVE_42 435.0
B_CELL_NAIVE_43 434.7
B_CELL_NAIVE_44 434.0
B_CELL_NAIVE_45 433.2
B_CELL_NAIVE_46 431.7
B_CELL_NAIVE_47 431.2
B_CELL_NAIVE_48 428.0
B_CELL_NAIVE_49 427.6
B_CELL_NAIVE_50 423.0
B_CELL_NAIVE_51 420.8
B_CELL_NAIVE_52 420.1
B_CELL_NAIVE_53 419.9
B_CELL_NAIVE_54 419.6
B_CELL_NAIVE_55 419.4
B_CELL_NAIVE_56 419.1
B_CELL_NAIVE_57 417.3
B_CELL_NAIVE_58 417.0
B_CELL_NAIVE_59 415.8
B_CELL_NAIVE_60 415.7
B_CELL_NAIVE_61 415.3
B_CELL_NAIVE_62 414.3
B_CELL_NAIVE_63 413.3
B_CELL_NAIVE_64 412.5
B_CELL_NAIVE_65 409.9
B_CELL_NAIVE_66 409.7
B_CELL_NAIVE_67 407.5
B_CELL_NAIVE_68 407.4
B_CELL_NAIVE_69 405.9
B_CELL_NAIVE_70 402.1
B_CELL_NAIVE_71 402.0
B_CELL_NAIVE_72 401.4
B_CELL_NAIVE_73 399.5
B_CELL_NAIVE_74 392.9
B_CELL_NAIVE_75 391.5
B_CELL_NAIVE_76 390.6
B_CELL_NAIVE_77 386.8
B_CELL_NAIVE_78 385.1
B_CELL_NAIVE_79 384.9
B_CELL_NAIVE_80 384.4
B_CELL_NAIVE_81 381.2
B_CELL_NAIVE_82 380.5
B_CELL_NAIVE_83 375.9
B_CELL_NAIVE_84 374.9
B_CELL_NAIVE_85 370.3
B_CELL_NAIVE_86 367.3
B_CELL_NAIVE_87 364.8
B_CELL_NAIVE_88 362.4
B_CELL_NAIVE_89 360.6
B_CELL_NAIVE_90 330.3
B_CELL_NAIVE_91 312.2
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