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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
66.9
nTPM
HPA Brain:
202.1
nTPM
GTEx:
66.9
nTPM
FANTOM5:
268.8
Scaled Tags Per Million
Pig:
57.7
nTPM
Mouse:
22.6
nTPM
Allen mouse:
0.5
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
202.1
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 152.1
1830
Male, age 51, unknown
188.8
1833
Male, age 53, unknown
183.3
1870
Female, age 42, unknown
173.9
2411
Female, age 72, unknown
172.4
2019
Male, age 18, unknown
167.8
2586
Male, age 75, left hemisphere
165.8
2828
Female, age 72, unknown
151.3
2666
Male, age 74, left hemisphere
129.6
1827
Male, age 72, unknown
107.5
2219
Male, age 76, both hemispheres
80.6
Dorsal raphe nucleus nTPM: 103.0
2750
Male, age 76, both hemispheres
162.0
1828
Male, age 53, unknown
110.9
2016
Female, age 72, unknown
108.8
2047
Male, age 72, unknown
72.0
2298
Female, age 72, unknown
61.4
Inferior colliculus nTPM: 94.4
2849
Male, age 72, unknown
108.7
1848
Female, age 42, unknown
103.7
1890
Male, age 53, unknown
95.2
2097
Female, age 72, unknown
70.1
Median raphe nucleus nTPM: 81.9
2220
Male, age 76, midline
81.9
Periaquaductal grey, anterior nTPM: 90.7
2502
Female, age 75, unknown
95.6
1947
Male, age 18, unknown
94.7
1795
Male, age 51, unknown
81.9
Periaquaductal grey, dorsal nTPM: 76.1
2464
Female, age 72, unknown
106.7
1831
Male, age 72, unknown
76.8
2850
Male, age 76, both hemispheres
72.9
1840
Male, age 53, unknown
48.1
Periaquaductal grey, lateral nTPM: 86.1
2272
Male, age 74, both hemispheres
95.8
2053
Male, age 18, unknown
93.8
2140
Male, age 76, both hemispheres
68.6
Pretectal area nTPM: 94.8
2407
Male, age 75, both hemispheres
130.9
1815
Male, age 53, unknown
130.4
2316
Male, age 76, right hemisphere
115.9
1817
Female, age 42, unknown
109.0
2825
Male, age 18, unknown
99.5
2007
Male, age 72, unknown
98.1
2667
Female, age 75, unknown
85.7
2273
Male, age 74, both hemispheres
81.5
2224
Female, age 72, unknown
72.6
1944
Female, age 72, unknown
61.5
1816
Male, age 51, unknown
57.6
Red nucleus nTPM: 202.1
2769
Male, age 72, unknown
231.7
1904
Male, age 53, unknown
230.6
1865
Male, age 51, unknown
222.5
2227
Male, age 72, unknown
222.5
2785
Male, age 18, unknown
216.8
2823
Male, age 76, right hemisphere
210.5
1821
Female, age 72, unknown
199.4
2588
Male, age 74, left hemisphere
191.3
1954
Female, age 42, unknown
191.1
2503
Female, age 72, unknown
190.4
2584
Male, age 75, left hemisphere
170.1
2725
Female, age 75, unknown
148.5
Substantia nigra nTPM: 106.1
2583
Male, age 75, right hemisphere
154.5
2590
Female, age 75, unknown
134.6
1851
Male, age 51, unknown
123.4
1889
Female, age 72, unknown
111.1
2699
Male, age 18, unknown
110.6
2409
Female, age 72, unknown
106.4
1941
Male, age 53, unknown
87.4
1916
Female, age 42, unknown
81.0
2665
Male, age 74, both hemispheres
78.4
2241
Male, age 72, unknown
73.3
Superior colliculus nTPM: 122.8
1913
Female, age 42, unknown
184.3
1995
Male, age 72, unknown
182.2
1839
Male, age 51, unknown
131.1
1895
Male, age 76, right hemisphere
130.3
2668
Female, age 75, unknown
123.3
2587
Male, age 74, left hemisphere
117.1
2664
Male, age 75, both hemispheres
107.3
1796
Male, age 53, unknown
106.0
2087
Female, age 72, unknown
75.4
2261
Male, age 18, unknown
71.3
Ventral tegmental area nTPM: 118.7
2223
Female, age 72, unknown
167.4
2410
Female, age 72, unknown
141.1
1942
Male, age 51, unknown
107.3
2218
Male, age 76, both hemispheres
101.5
1915
Female, age 42, unknown
97.5
2021
Male, age 53, unknown
97.2
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
66.9
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 66.9
Samples: 139
Max nTPM: 275.9
Min nTPM: 23.2
Std nTPM: 36.0
Median nTPM: 57.7
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
275.9
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
204.2
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
189.0
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
175.8
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
143.4
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
121.6
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
120.3
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
117.4
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
115.4
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
113.7
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
112.6
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
112.3
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
109.0
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
108.6
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
107.2
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
106.4
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
103.2
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
103.1
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
100.7
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
98.6
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
96.7
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
96.5
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
94.6
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
93.8
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
90.9
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
90.7
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
89.7
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
89.0
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
86.4
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
85.2
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
83.5
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
83.3
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
83.1
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
81.4
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
80.4
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
79.5
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
79.4
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
78.4
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
78.2
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
77.7
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
77.5
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
77.3
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
75.6
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
74.6
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
73.6
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
71.1
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
70.9
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
70.4
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
69.9
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
69.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
67.9
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
67.8
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
67.6
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
66.9
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
66.5
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
66.5
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
65.5
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
64.7
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
64.1
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
63.8
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
63.6
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
62.9
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
62.8
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
61.8
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
61.3
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
61.0
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
59.5
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
59.2
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
58.4
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
57.7
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
56.9
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
56.8
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
56.0
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
55.7
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
55.6
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
55.3
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
55.1
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
55.0
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
55.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
54.3
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
53.8
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
53.2
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
53.1
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
53.1
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
53.0
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
52.9
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
52.7
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
52.4
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
52.4
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
52.4
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
52.0
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
51.5
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
50.7
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
50.6
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
50.5
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
50.2
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
49.5
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
48.5
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
48.4
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
47.8
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
46.9
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
46.6
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
45.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
43.0
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
42.5
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
41.6
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
41.4
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
41.3
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
41.2
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
39.6
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
39.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
39.2
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
38.9
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
38.4
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
37.8
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
37.0
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
36.4
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
36.1
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
35.8
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
35.4
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
34.4
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
33.7
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
33.7
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
33.5
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
32.4
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
32.3
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
30.7
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
30.4
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
30.1
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
30.0
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
29.4
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
28.6
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
27.5
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
26.6
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
25.8
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
25.1
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
24.8
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
23.8
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
23.2
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
22.6
Mouse sample
Sample description
nTPM
Midbrain nTPM: 22.6
Samples: 4
Max nTPM: 24.0
Min nTPM: 18.7
Sample A
Male
24.0
Sample B
Male
23.8
Sample C
Female
18.7
Sample D
Female
23.9
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.