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  • TISSUE

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  • ATP1B2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:140.2 nTPM
HPA Brain:601.9 nTPM
GTEx:140.2 nTPM
Pig:507.9 nTPM
Mouse:404.9 nTPM
Allen mouse:18.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

601.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 482.2
1961 Female, age 42, unknown 535.5
2226 Male, age 75, left hemisphere 428.8
Dorsomedial nucleus
nTPM: 556.5
1989 Male, age 62, unknown 688.7
2017 Female, age 42, unknown 515.1
2041 Female, age 72, unknown 465.9
Lateral hypothalamic area
nTPM: 359.8
1791 Male, age 80, right hemisphere 521.5
2412 Male, age 62, unknown 339.2
2271 Male, age 75, both hemispheres 301.0
2228 Male, age 66, unknown 277.2
Mammillary body
nTPM: 601.9
2413 Male, age 66, unknown 776.1
1834 Female, age 42, unknown 614.5
1945 Male, age 80, right hemisphere 602.9
1923 Female, age 72, unknown 579.2
1948 Female, age 72, unknown 436.5
Paraventricular nucleus
nTPM: 408.1
2700 Male, age 62, unknown 408.1
Preoptic area
nTPM: 536.9
1861 Female, age 42, unknown 723.2
1907 Male, age 80, right hemisphere 481.8
2414 Female, age 72, unknown 405.7
Supraoptic nucleus
nTPM: 442.0
2835 Female, age 72, unknown 487.0
1894 Female, age 72, unknown 431.0
2043 Male, age 62, unknown 408.0
Ventromedial nucleus
nTPM: 589.9
1822 Female, age 42, unknown 602.5
1982 Female, age 72, unknown 577.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

140.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 140.2
Samples: 257

Max nTPM: 587.8
Min nTPM: 34.6
Std nTPM: 77.1
Median nTPM: 127.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 587.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 531.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 468.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 420.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 410.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 380.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 371.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 323.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 299.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 296.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 289.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 281.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 270.9
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 266.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 262.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 261.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 248.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 245.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 240.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 237.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 235.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 232.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 230.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 228.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 225.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 215.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 214.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 213.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 211.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 207.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 205.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 204.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 202.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 201.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 201.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 200.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 200.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 200.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 200.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 195.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 193.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 193.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 192.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 188.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 187.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 186.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 186.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 186.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 185.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 181.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 180.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 177.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 177.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 176.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 174.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 174.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 174.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 173.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 172.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 171.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 170.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 170.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 170.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 169.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 169.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 169.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 169.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 169.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 168.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 167.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 166.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 166.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 165.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 164.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 164.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 164.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 162.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 162.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 161.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 161.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 159.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 155.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 155.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 151.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 150.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 150.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 150.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 149.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 146.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 146.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 145.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 145.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 145.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 144.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 141.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 141.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 141.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 141.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 141.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 140.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 140.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 140.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 140.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 139.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 138.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 138.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 138.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 138.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 137.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 137.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 137.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 136.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 136.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 135.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 134.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 134.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 133.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 133.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 133.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 132.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 132.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 132.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 130.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 130.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 129.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 128.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 127.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 127.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 127.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 126.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 126.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 125.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 125.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 125.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 125.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 124.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 124.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 122.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 121.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 120.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 120.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 120.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 119.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 119.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 119.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 118.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 118.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 118.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 117.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 114.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 113.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 113.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 113.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 112.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 108.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 108.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 107.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 107.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 106.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 106.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 106.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 106.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 105.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 105.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 105.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 104.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 104.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 103.2
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 103.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 102.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 102.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 102.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 100.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 100.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 100.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 100.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 100.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 100.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 100.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 99.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 99.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 98.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 98.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 95.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 95.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 94.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 93.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 93.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 92.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 92.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 91.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 91.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 91.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 90.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 90.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 90.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 88.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 88.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 87.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 87.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 86.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 86.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 86.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 85.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 85.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 85.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 85.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 83.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 83.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 83.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 82.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 80.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 78.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 77.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 76.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 75.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 74.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 74.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 72.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 72.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 71.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 71.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 71.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 70.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 70.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 68.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 67.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 66.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 66.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 65.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 64.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 64.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 64.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 63.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 62.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 61.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 59.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 58.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 57.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 57.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 57.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 57.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 56.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 56.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 55.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 54.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 53.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 52.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 51.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 48.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 47.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 45.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 44.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 40.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 37.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 34.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 34.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

507.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 507.9
Samples: 4

Max nTPM: 641.5
Min nTPM: 388.2
Sample A Female 641.5
Sample B Female 500.5
Sample C Male 501.5
Sample D Male 388.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

404.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 404.9
Samples: 4

Max nTPM: 418.7
Min nTPM: 386.0
Sample A Male 386.0
Sample B Male 406.3
Sample C Female 418.7
Sample D Female 408.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

18.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 18.8
74819255 Antisense, RP_060315_02_D07, Mouse strain C57BL/6J (56 days, male) 19.3
68744958 Antisense, RP_050210_01_A04, Mouse strain C57BL/6J (56 days, male) 18.2

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