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BETA
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  • RPS4Y1
IMMUNE CELL MONOCYTES Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Monocytes
Immune cell methods
MONOCYTES - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:97.3 nTPM
Monaco:70.6 nTPM
Schmiedel:233.6 TPM

MONOCYTES - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

97.3
HPA sample nTPM
Classical monocyte
nTPM: 97.3
Samples: 6

Max nTPM: 238.0
Min nTPM: 0.4
P10809_1003 238.0
P10809_1020 193.4
P10809_1039 0.7
P10809_1058 0.4
P10809_1080 150.9
P10809_1107 0.4
Intermediate monocyte
nTPM: 84.2
Samples: 6

Max nTPM: 214.7
Min nTPM: 0.2
P10809_1004 148.3
P10809_1023 214.7
P10809_1042 0.5
P10809_1061 0.3
P10809_1081 141.2
P10809_1108 0.2
Non-classical monocyte
nTPM: 57.1
Samples: 5

Max nTPM: 151.3
Min nTPM: 0.4
P10809_1005 151.3
P10809_1053 1.0
P10809_1072 0.5
P10809_1082 132.5
P10809_1109 0.4

MONOCYTES - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

70.6
Monaco sample nTPM
Classical monocyte
nTPM: 70.6
Samples: 4

Max nTPM: 173.0
Min nTPM: 0.0
RHH5313_R3680 0.0
RHH5221_R3593 109.3
RHH5250_R3622 173.0
RHH5279_R3651 0.2
Intermediate monocyte
nTPM: 58.2
Samples: 4

Max nTPM: 132.2
Min nTPM: 0.0
RHH5314_R3681 0.0
RHH5222_R3594 100.4
RHH5251_R3623 132.2
RHH5280_R3652 0.0
Non-classical monocyte
nTPM: 45.0
Samples: 4

Max nTPM: 105.0
Min nTPM: 0.0
RHH5315_R3682 0.0
RHH5223_R3595 74.8
RHH5252_R3624 105.0
RHH5281_R3653 0.0

MONOCYTES - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

233.6
Schmiedel sample id TPM
Classical monocyte
TPM: 233.6
Samples: 91

Max TPM: 463.3
Min TPM: 0.0
MONOCYTES_1 463.3
MONOCYTES_2 450.3
MONOCYTES_3 449.3
MONOCYTES_4 436.1
MONOCYTES_5 432.4
MONOCYTES_6 422.3
MONOCYTES_7 422.2
MONOCYTES_8 421.5
MONOCYTES_9 420.1
MONOCYTES_10 419.4
MONOCYTES_11 419.1
MONOCYTES_12 418.6
MONOCYTES_13 418.4
MONOCYTES_14 415.8
MONOCYTES_15 415.6
MONOCYTES_16 412.9
MONOCYTES_17 412.0
MONOCYTES_18 410.8
MONOCYTES_19 407.4
MONOCYTES_20 405.0
MONOCYTES_21 400.5
MONOCYTES_22 400.2
MONOCYTES_23 399.9
MONOCYTES_24 399.7
MONOCYTES_25 398.9
MONOCYTES_26 398.3
MONOCYTES_27 398.2
MONOCYTES_28 394.4
MONOCYTES_29 393.4
MONOCYTES_30 392.0
MONOCYTES_31 390.7
MONOCYTES_32 387.0
MONOCYTES_33 384.9
MONOCYTES_34 384.2
MONOCYTES_35 382.2
MONOCYTES_36 380.4
MONOCYTES_37 379.8
MONOCYTES_38 379.7
MONOCYTES_39 375.2
MONOCYTES_40 374.3
MONOCYTES_41 372.9
MONOCYTES_42 370.3
MONOCYTES_43 369.8
MONOCYTES_44 367.5
MONOCYTES_45 367.1
MONOCYTES_46 364.7
MONOCYTES_47 360.4
MONOCYTES_48 357.6
MONOCYTES_49 353.8
MONOCYTES_50 353.0
MONOCYTES_51 344.9
MONOCYTES_52 338.3
MONOCYTES_53 327.3
MONOCYTES_54 326.9
MONOCYTES_55 1.7
MONOCYTES_56 0.8
MONOCYTES_57 0.8
MONOCYTES_58 0.7
MONOCYTES_59 0.7
MONOCYTES_60 0.7
MONOCYTES_61 0.7
MONOCYTES_62 0.7
MONOCYTES_63 0.7
MONOCYTES_64 0.6
MONOCYTES_65 0.6
MONOCYTES_66 0.5
MONOCYTES_67 0.5
MONOCYTES_68 0.5
MONOCYTES_69 0.5
MONOCYTES_70 0.4
MONOCYTES_71 0.4
MONOCYTES_72 0.4
MONOCYTES_73 0.4
MONOCYTES_74 0.4
MONOCYTES_75 0.4
MONOCYTES_76 0.3
MONOCYTES_77 0.3
MONOCYTES_78 0.3
MONOCYTES_79 0.3
MONOCYTES_80 0.3
MONOCYTES_81 0.3
MONOCYTES_82 0.3
MONOCYTES_83 0.2
MONOCYTES_84 0.2
MONOCYTES_85 0.2
MONOCYTES_86 0.2
MONOCYTES_87 0.2
MONOCYTES_88 0.2
MONOCYTES_89 0.1
MONOCYTES_90 0.0
MONOCYTES_91 0.0
Show allShow less
Non-classical monocyte
TPM: 212.8
Samples: 90

Max TPM: 463.4
Min TPM: 0.0
M2_1 463.4
M2_2 437.9
M2_3 429.0
M2_4 426.4
M2_5 414.8
M2_6 407.3
M2_7 406.5
M2_8 403.1
M2_9 397.7
M2_10 386.4
M2_11 383.6
M2_12 381.6
M2_13 380.3
M2_14 379.8
M2_15 379.3
M2_16 377.9
M2_17 377.6
M2_18 376.4
M2_19 365.3
M2_20 364.8
M2_21 363.7
M2_22 362.6
M2_23 360.0
M2_24 358.2
M2_25 357.1
M2_26 357.1
M2_27 355.8
M2_28 353.9
M2_29 353.7
M2_30 352.3
M2_31 351.0
M2_32 349.6
M2_33 349.1
M2_34 349.0
M2_35 346.7
M2_36 345.9
M2_37 345.7
M2_38 341.9
M2_39 340.1
M2_40 338.9
M2_41 337.5
M2_42 336.6
M2_43 333.6
M2_44 333.2
M2_45 332.4
M2_46 331.9
M2_47 328.1
M2_48 317.3
M2_49 315.5
M2_50 306.3
M2_51 300.9
M2_52 299.6
M2_53 289.5
M2_54 6.6
M2_55 0.9
M2_56 0.7
M2_57 0.6
M2_58 0.6
M2_59 0.6
M2_60 0.6
M2_61 0.6
M2_62 0.5
M2_63 0.5
M2_64 0.4
M2_65 0.4
M2_66 0.3
M2_67 0.3
M2_68 0.3
M2_69 0.3
M2_70 0.3
M2_71 0.3
M2_72 0.2
M2_73 0.2
M2_74 0.2
M2_75 0.2
M2_76 0.2
M2_77 0.2
M2_78 0.2
M2_79 0.1
M2_80 0.1
M2_81 0.1
M2_82 0.1
M2_83 0.1
M2_84 0.1
M2_85 0.1
M2_86 0.0
M2_87 0.0
M2_88 0.0
M2_89 0.0
M2_90 0.0
Show allShow less

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