A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
97.3
nTPM
Monaco:
70.6
nTPM
Schmiedel:
233.6
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
97.3
HPA sample
nTPM
Classical monocyte nTPM: 97.3
Samples: 6
Max nTPM: 238.0
Min nTPM: 0.4
P10809_1003
238.0
P10809_1020
193.4
P10809_1039
0.7
P10809_1058
0.4
P10809_1080
150.9
P10809_1107
0.4
Intermediate monocyte nTPM: 84.2
Samples: 6
Max nTPM: 214.7
Min nTPM: 0.2
P10809_1004
148.3
P10809_1023
214.7
P10809_1042
0.5
P10809_1061
0.3
P10809_1081
141.2
P10809_1108
0.2
Non-classical monocyte nTPM: 57.1
Samples: 5
Max nTPM: 151.3
Min nTPM: 0.4
P10809_1005
151.3
P10809_1053
1.0
P10809_1072
0.5
P10809_1082
132.5
P10809_1109
0.4
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
70.6
Monaco sample
nTPM
Classical monocyte nTPM: 70.6
Samples: 4
Max nTPM: 173.0
Min nTPM: 0.0
RHH5313_R3680
0.0
RHH5221_R3593
109.3
RHH5250_R3622
173.0
RHH5279_R3651
0.2
Intermediate monocyte nTPM: 58.2
Samples: 4
Max nTPM: 132.2
Min nTPM: 0.0
RHH5314_R3681
0.0
RHH5222_R3594
100.4
RHH5251_R3623
132.2
RHH5280_R3652
0.0
Non-classical monocyte nTPM: 45.0
Samples: 4
Max nTPM: 105.0
Min nTPM: 0.0
RHH5315_R3682
0.0
RHH5223_R3595
74.8
RHH5252_R3624
105.0
RHH5281_R3653
0.0
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
233.6
Schmiedel sample id
TPM
Classical monocyte TPM: 233.6
Samples: 91
Max TPM: 463.3
Min TPM: 0.0
MONOCYTES_1
463.3
MONOCYTES_2
450.3
MONOCYTES_3
449.3
MONOCYTES_4
436.1
MONOCYTES_5
432.4
MONOCYTES_6
422.3
MONOCYTES_7
422.2
MONOCYTES_8
421.5
MONOCYTES_9
420.1
MONOCYTES_10
419.4
MONOCYTES_11
419.1
MONOCYTES_12
418.6
MONOCYTES_13
418.4
MONOCYTES_14
415.8
MONOCYTES_15
415.6
MONOCYTES_16
412.9
MONOCYTES_17
412.0
MONOCYTES_18
410.8
MONOCYTES_19
407.4
MONOCYTES_20
405.0
MONOCYTES_21
400.5
MONOCYTES_22
400.2
MONOCYTES_23
399.9
MONOCYTES_24
399.7
MONOCYTES_25
398.9
MONOCYTES_26
398.3
MONOCYTES_27
398.2
MONOCYTES_28
394.4
MONOCYTES_29
393.4
MONOCYTES_30
392.0
MONOCYTES_31
390.7
MONOCYTES_32
387.0
MONOCYTES_33
384.9
MONOCYTES_34
384.2
MONOCYTES_35
382.2
MONOCYTES_36
380.4
MONOCYTES_37
379.8
MONOCYTES_38
379.7
MONOCYTES_39
375.2
MONOCYTES_40
374.3
MONOCYTES_41
372.9
MONOCYTES_42
370.3
MONOCYTES_43
369.8
MONOCYTES_44
367.5
MONOCYTES_45
367.1
MONOCYTES_46
364.7
MONOCYTES_47
360.4
MONOCYTES_48
357.6
MONOCYTES_49
353.8
MONOCYTES_50
353.0
MONOCYTES_51
344.9
MONOCYTES_52
338.3
MONOCYTES_53
327.3
MONOCYTES_54
326.9
MONOCYTES_55
1.7
MONOCYTES_56
0.8
MONOCYTES_57
0.8
MONOCYTES_58
0.7
MONOCYTES_59
0.7
MONOCYTES_60
0.7
MONOCYTES_61
0.7
MONOCYTES_62
0.7
MONOCYTES_63
0.7
MONOCYTES_64
0.6
MONOCYTES_65
0.6
MONOCYTES_66
0.5
MONOCYTES_67
0.5
MONOCYTES_68
0.5
MONOCYTES_69
0.5
MONOCYTES_70
0.4
MONOCYTES_71
0.4
MONOCYTES_72
0.4
MONOCYTES_73
0.4
MONOCYTES_74
0.4
MONOCYTES_75
0.4
MONOCYTES_76
0.3
MONOCYTES_77
0.3
MONOCYTES_78
0.3
MONOCYTES_79
0.3
MONOCYTES_80
0.3
MONOCYTES_81
0.3
MONOCYTES_82
0.3
MONOCYTES_83
0.2
MONOCYTES_84
0.2
MONOCYTES_85
0.2
MONOCYTES_86
0.2
MONOCYTES_87
0.2
MONOCYTES_88
0.2
MONOCYTES_89
0.1
MONOCYTES_90
0.0
MONOCYTES_91
0.0
Show allShow less
Non-classical monocyte TPM: 212.8
Samples: 90
Max TPM: 463.4
Min TPM: 0.0
M2_1
463.4
M2_2
437.9
M2_3
429.0
M2_4
426.4
M2_5
414.8
M2_6
407.3
M2_7
406.5
M2_8
403.1
M2_9
397.7
M2_10
386.4
M2_11
383.6
M2_12
381.6
M2_13
380.3
M2_14
379.8
M2_15
379.3
M2_16
377.9
M2_17
377.6
M2_18
376.4
M2_19
365.3
M2_20
364.8
M2_21
363.7
M2_22
362.6
M2_23
360.0
M2_24
358.2
M2_25
357.1
M2_26
357.1
M2_27
355.8
M2_28
353.9
M2_29
353.7
M2_30
352.3
M2_31
351.0
M2_32
349.6
M2_33
349.1
M2_34
349.0
M2_35
346.7
M2_36
345.9
M2_37
345.7
M2_38
341.9
M2_39
340.1
M2_40
338.9
M2_41
337.5
M2_42
336.6
M2_43
333.6
M2_44
333.2
M2_45
332.4
M2_46
331.9
M2_47
328.1
M2_48
317.3
M2_49
315.5
M2_50
306.3
M2_51
300.9
M2_52
299.6
M2_53
289.5
M2_54
6.6
M2_55
0.9
M2_56
0.7
M2_57
0.6
M2_58
0.6
M2_59
0.6
M2_60
0.6
M2_61
0.6
M2_62
0.5
M2_63
0.5
M2_64
0.4
M2_65
0.4
M2_66
0.3
M2_67
0.3
M2_68
0.3
M2_69
0.3
M2_70
0.3
M2_71
0.3
M2_72
0.2
M2_73
0.2
M2_74
0.2
M2_75
0.2
M2_76
0.2
M2_77
0.2
M2_78
0.2
M2_79
0.1
M2_80
0.1
M2_81
0.1
M2_82
0.1
M2_83
0.1
M2_84
0.1
M2_85
0.1
M2_86
0.0
M2_87
0.0
M2_88
0.0
M2_89
0.0
M2_90
0.0
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.