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  • TISSUE

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  • APOC1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:343.1 nTPM
HPA Brain:132.0 nTPM
GTEx:343.1 nTPM
Mouse:53.4 nTPM
Allen mouse:1.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

132.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 115.3
1961 Female, age 42, unknown 152.5
2226 Male, age 75, left hemisphere 78.0
Dorsomedial nucleus
nTPM: 118.1
2041 Female, age 72, unknown 173.8
1989 Male, age 62, unknown 99.3
2017 Female, age 42, unknown 81.1
Lateral hypothalamic area
nTPM: 122.6
2271 Male, age 75, both hemispheres 151.7
1791 Male, age 80, right hemisphere 140.6
2412 Male, age 62, unknown 135.3
2228 Male, age 66, unknown 62.7
Mammillary body
nTPM: 91.7
1948 Female, age 72, unknown 101.7
1834 Female, age 42, unknown 98.1
1945 Male, age 80, right hemisphere 97.1
2413 Male, age 66, unknown 94.7
1923 Female, age 72, unknown 67.0
Paraventricular nucleus
nTPM: 106.9
2700 Male, age 62, unknown 106.9
Preoptic area
nTPM: 124.7
1861 Female, age 42, unknown 179.9
1907 Male, age 80, right hemisphere 101.5
2414 Female, age 72, unknown 92.8
Supraoptic nucleus
nTPM: 112.0
1894 Female, age 72, unknown 129.4
2835 Female, age 72, unknown 120.8
2043 Male, age 62, unknown 85.8
Ventromedial nucleus
nTPM: 132.0
1982 Female, age 72, unknown 145.4
1822 Female, age 42, unknown 118.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

343.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 343.1
Samples: 257

Max nTPM: 2268.7
Min nTPM: 38.5
Std nTPM: 239.7
Median nTPM: 288.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 2268.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 1321.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 1223.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 1143.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 1126.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 1032.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 959.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 901.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 895.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 827.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 789.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 789.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 787.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 782.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 747.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 728.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 727.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 698.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 676.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 643.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 638.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 635.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 611.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 598.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 594.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 592.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 590.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 587.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 575.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 574.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 571.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 567.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 563.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 553.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 548.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 544.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 517.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 510.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 501.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 494.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 492.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 488.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 477.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 469.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 467.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 465.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 463.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 454.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 450.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 450.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 442.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 438.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 437.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 436.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 429.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 429.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 425.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 425.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 423.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 421.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 419.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 418.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 415.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 414.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 410.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 409.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 408.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 407.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 402.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 399.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 398.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 398.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 397.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 396.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 394.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 391.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 390.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 388.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 380.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 379.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 376.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 375.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 370.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 369.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 364.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 363.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 360.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 352.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 351.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 346.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 345.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 345.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 345.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 342.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 341.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 340.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 339.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 338.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 337.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 334.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 333.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 332.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 332.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 325.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 325.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 325.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 323.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 320.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 319.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 317.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 316.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 316.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 316.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 312.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 307.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 306.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 306.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 305.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 304.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 303.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 302.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 298.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 297.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 295.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 291.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 290.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 290.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 289.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 288.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 287.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 286.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 285.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 283.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 282.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 282.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 282.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 276.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 276.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 271.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 270.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 270.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 268.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 267.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 267.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 265.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 263.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 262.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 261.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 260.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 258.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 256.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 255.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 251.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 251.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 250.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 250.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 250.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 250.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 246.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 245.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 244.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 244.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 243.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 243.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 242.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 241.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 239.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 238.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 237.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 237.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 236.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 235.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 234.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 231.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 228.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 228.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 227.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 226.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 226.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 225.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 224.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 223.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 217.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 216.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 214.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 214.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 210.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 209.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 208.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 206.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 205.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 204.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 201.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 199.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 195.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 192.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 190.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 189.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 188.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 187.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 184.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 183.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 183.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 182.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 180.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 180.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 179.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 179.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 179.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 178.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 176.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 173.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 171.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 171.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 170.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 169.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 166.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 164.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 161.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 159.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 158.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 157.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 157.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 155.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 152.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 150.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 144.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 138.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 138.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 131.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 130.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 129.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 128.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 127.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 125.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 122.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 119.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 115.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 114.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 112.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 111.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 109.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 104.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 102.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 100.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 99.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 94.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 91.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 89.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 88.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 87.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 78.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 58.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 55.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 55.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 53.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 38.5
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HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

53.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 53.4
Samples: 4

Max nTPM: 66.1
Min nTPM: 44.9
Sample A Male 44.9
Sample B Male 57.1
Sample C Female 66.1
Sample D Female 45.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.8
68910959 Antisense, RP_041214_01_G03, Mouse strain C57BL/6J (56 days, male) 1.8

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