HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:21.8 nTPM
HPA Brain:11.8 nTPM
GTEx:21.8 nTPM
FANTOM5:16.6 Scaled Tags Per Million
Pig:11.6 nTPM
Mouse:37.6 nTPM
Allen mouse:4.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049535
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 11.8
Sample id Sample description nTPM
Hippocampus
nTPM: 11.3
1898 Male, age 80, left hemisphere 11.9
2621 Female, age 67, right hemisphere 11.6
1911 Female, age 85, right hemisphere 11.4
2148 Female, age 91, left hemisphere 11.0
1855 Male, age 76, left hemisphere 10.9
2529 Female, age 94, left hemisphere 10.9
Dentate gyrus
nTPM: 11.1
2246 Female, age 85, both hemispheres 12.4
2531 Female, age 67, both hemispheres 11.5
2528 Male, age 74, both hemispheres 11.4
1927 Female, age 91, both hemispheres 10.9
2530 Female, age 94, left hemisphere 10.6
2010 Male, age 76, both hemispheres 10.1
Entorhinal gyrus
nTPM: 10.9
1938 Female, age 85, left hemisphere 12.0
2613 Female, age 94, left hemisphere 11.4
2686 Male, age 75, right hemisphere 10.8
2764 Male, age 80, right hemisphere 10.8
1787 Male, age 76, left hemisphere 10.3
2117 Female, age 91, right hemisphere 10.1
Hippocampus, CA1
nTPM: 11.4
2749 Male, age 80, left hemisphere 12.2
1873 Female, age 85, both hemispheres 11.8
2527 Male, age 74, both hemispheres 11.7
2082 Female, age 91, right hemisphere 10.7
2045 Male, age 76, both hemispheres 10.6
Hippocampus, CA2
nTPM: 11.4
1892 Male, age 76, both hemispheres 13.7
2249 Male, age 74, both hemispheres 11.5
1963 Male, age 80, left hemisphere 11.4
2113 Female, age 91, right hemisphere 11.0
2437 Female, age 94, left hemisphere 10.6
1940 Female, age 85, left hemisphere 10.4
Hippocampus, CA3
nTPM: 11.6
1867 Male, age 76, both hemispheres 13.7
2137 Male, age 80, left hemisphere 13.5
2436 Male, age 74, both hemispheres 12.0
1891 Female, age 85, both hemispheres 11.4
2620 Female, age 94, left hemisphere 11.3
2861 Female, age 67, both hemispheres 7.9
Parahippocampal cortex
nTPM: 11.8
2532 Female, age 72, left hemisphere 13.1
1850 Male, age 80, both hemispheres 12.4
2692 Male, age 74, both hemispheres 12.3
2245 Female, age 91, both hemispheres 12.0
2018 Male, age 76, both hemispheres 11.8
1933 Female, age 85, both hemispheres 11.6
1990 Female, age 91, right hemisphere 11.5
2250 Female, age 67, right hemisphere 11.2
2693 Female, age 94, both hemispheres 11.1
2622 Female, age 67, right hemisphere 11.0
Perirhinal gyrus
nTPM: 11.2
1794 Male, age 80, right hemisphere 11.8
1841 Female, age 85, right hemisphere 11.8
1847 Female, age 91, left hemisphere 11.0
2848 Male, age 76, right hemisphere 11.0
2521 Female, age 94, right hemisphere 10.5
Subiculum
nTPM: 11.0
2438 Female, age 94, left hemisphere 12.0
1901 Male, age 80, both hemispheres 11.9
2729 Female, age 91, right hemisphere 11.3
1977 Female, age 85, both hemispheres 11.1
2619 Male, age 74, both hemispheres 10.1
2042 Male, age 76, both hemispheres 9.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 21.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.8
Samples: 197

Max nTPM: 46.5
Min nTPM: 9.6
Std nTPM: 5.3
Median nTPM: 21.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 46.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 38.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 34.9
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 33.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 32.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 31.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 31.7
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 31.7
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 31.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 31.3
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 31.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 16.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.6
FF:10169-103B7 60 years, female 17.6
FF:10153-102I9 76 years, female 15.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 11.6
Pig sample Sample description nTPM
Subiculum
nTPM: 11.3
Samples: 4

Max nTPM: 12.7
Min nTPM: 8.2
Sample A Female 8.2
Sample B Female 11.9
Sample C Male 12.2
Sample D Male 12.7
Dorsal hippocampus
nTPM: 10.2
Samples: 4

Max nTPM: 13.0
Min nTPM: 7.3
Sample A Female 7.3
Sample B Female 9.8
Sample C Male 10.7
Sample D Male 13.0
Entorhinal cortex
nTPM: 11.6
Samples: 4

Max nTPM: 13.9
Min nTPM: 10.4
Sample A Female 10.4
Sample B Female 10.8
Sample C Male 11.1
Sample D Male 13.9
Ventral hippocampus
nTPM: 10.9
Samples: 4

Max nTPM: 13.5
Min nTPM: 8.1
Sample A Female 11.5
Sample B Female 13.5
Sample C Male 8.1
Sample D Male 10.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 37.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.0
Samples: 4

Max nTPM: 38.2
Min nTPM: 32.5
Sample A Male 32.5
Sample B Male 37.6
Sample C Female 38.2
Sample D Female 35.5
Hippocampal formation
nTPM: 37.6
Samples: 4

Max nTPM: 40.7
Min nTPM: 33.6
Sample A Male 40.7
Sample B Male 37.1
Sample C Female 33.6
Sample D Female 39.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.7
68341489 Antisense, RP_041207_01_F06, Mouse strain C57BL/6J (56 days, male) 4.7

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