HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:613.2 nTPM
HPA Brain:494.1 nTPM
GTEx:613.2 nTPM
FANTOM5:400.4 Scaled Tags Per Million
Pig:653.9 nTPM
Mouse:851.0 nTPM
Allen mouse:18.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 494.1
Sample id Sample description nTPM
Hippocampus
nTPM: 443.0
1898 Male, age 80, left hemisphere 617.9
2148 Female, age 91, left hemisphere 548.8
1855 Male, age 76, left hemisphere 486.0
2621 Female, age 67, right hemisphere 404.8
1911 Female, age 85, right hemisphere 343.8
2529 Female, age 94, left hemisphere 256.5
Dentate gyrus
nTPM: 460.6
2531 Female, age 67, both hemispheres 712.5
2010 Male, age 76, both hemispheres 483.7
1927 Female, age 91, both hemispheres 480.6
2246 Female, age 85, both hemispheres 376.1
2528 Male, age 74, both hemispheres 369.2
2530 Female, age 94, left hemisphere 341.7
Entorhinal gyrus
nTPM: 280.6
2764 Male, age 80, right hemisphere 407.4
1787 Male, age 76, left hemisphere 308.3
1938 Female, age 85, left hemisphere 303.1
2117 Female, age 91, right hemisphere 237.1
2686 Male, age 75, right hemisphere 215.4
2613 Female, age 94, left hemisphere 212.3
Hippocampus, CA1
nTPM: 435.8
2045 Male, age 76, both hemispheres 575.8
2749 Male, age 80, left hemisphere 561.5
1873 Female, age 85, both hemispheres 502.0
2527 Male, age 74, both hemispheres 339.5
2082 Female, age 91, right hemisphere 200.3
Hippocampus, CA2
nTPM: 362.1
1963 Male, age 80, left hemisphere 549.9
1892 Male, age 76, both hemispheres 451.8
1940 Female, age 85, left hemisphere 333.8
2437 Female, age 94, left hemisphere 283.8
2249 Male, age 74, both hemispheres 279.4
2113 Female, age 91, right hemisphere 273.9
Hippocampus, CA3
nTPM: 468.9
2861 Female, age 67, both hemispheres 694.0
2137 Male, age 80, left hemisphere 564.1
2620 Female, age 94, left hemisphere 560.8
1867 Male, age 76, both hemispheres 401.9
1891 Female, age 85, both hemispheres 324.7
2436 Male, age 74, both hemispheres 267.9
Parahippocampal cortex
nTPM: 371.1
2245 Female, age 91, both hemispheres 482.3
2532 Female, age 72, left hemisphere 462.7
1850 Male, age 80, both hemispheres 426.6
2250 Female, age 67, right hemisphere 404.4
2622 Female, age 67, right hemisphere 387.1
2693 Female, age 94, both hemispheres 387.1
1933 Female, age 85, both hemispheres 374.1
2018 Male, age 76, both hemispheres 322.4
1990 Female, age 91, right hemisphere 278.6
2692 Male, age 74, both hemispheres 185.6
Perirhinal gyrus
nTPM: 494.1
1794 Male, age 80, right hemisphere 616.5
1841 Female, age 85, right hemisphere 531.9
2521 Female, age 94, right hemisphere 474.3
1847 Female, age 91, left hemisphere 441.3
2848 Male, age 76, right hemisphere 406.5
Subiculum
nTPM: 266.0
2729 Female, age 91, right hemisphere 350.1
1977 Female, age 85, both hemispheres 327.1
1901 Male, age 80, both hemispheres 305.2
2619 Male, age 74, both hemispheres 236.9
2042 Male, age 76, both hemispheres 203.8
2438 Female, age 94, left hemisphere 172.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 613.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 613.2
Samples: 255

Max nTPM: 1575.3
Min nTPM: 84.7
Std nTPM: 317.5
Median nTPM: 583.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 1575.3
GTEX-11DXY-0011-R1b-SM-GI4VQ 60-69 years, male 1539.0
GTEX-1RQEC-0011-R1b-SM-F2I2E 60-69 years, male 1534.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1417.4
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 1407.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1403.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1336.0
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 1332.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 1315.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 1274.8
GTEX-15DYW-0011-R1a-SM-H6Q6Q 60-69 years, female 1266.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 400.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 400.4
FF:10169-103B7 60 years, female 576.4
FF:10153-102I9 76 years, female 224.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 653.9
Pig sample Sample description nTPM
Subiculum
nTPM: 461.5
Samples: 4

Max nTPM: 537.3
Min nTPM: 381.6
Sample A Female 537.3
Sample B Female 423.1
Sample C Male 381.6
Sample D Male 504.1
Dorsal hippocampus
nTPM: 653.9
Samples: 4

Max nTPM: 898.1
Min nTPM: 411.3
Sample A Female 898.1
Sample B Female 822.8
Sample C Male 411.3
Sample D Male 483.3
Entorhinal cortex
nTPM: 606.6
Samples: 4

Max nTPM: 691.5
Min nTPM: 498.5
Sample A Female 691.5
Sample B Female 571.5
Sample C Male 664.9
Sample D Male 498.5
Ventral hippocampus
nTPM: 526.7
Samples: 4

Max nTPM: 778.7
Min nTPM: 326.0
Sample A Female 533.8
Sample B Female 326.0
Sample C Male 468.3
Sample D Male 778.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 851.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 831.7
Samples: 4

Max nTPM: 873.4
Min nTPM: 731.4
Sample A Male 859.9
Sample B Male 862.1
Sample C Female 731.4
Sample D Female 873.4
Hippocampal formation
nTPM: 851.0
Samples: 4

Max nTPM: 962.2
Min nTPM: 736.0
Sample A Male 798.1
Sample B Male 962.2
Sample C Female 907.5
Sample D Female 736.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 18.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.5
760 Antisense, RP_040324_01_F03, Mouse strain C57BL/6J (56 days, male) 18.5
761 Antisense, RP_040324_01_F03, Mouse strain C57BL/6J (56 days, male) 18.5

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