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  • TISSUE

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  • OLFM1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:137.3 nTPM
HPA Brain:153.4 nTPM
GTEx:137.3 nTPM
Pig:116.0 nTPM
Mouse:176.2 nTPM
Allen mouse:9.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

153.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 107.0
2226 Male, age 75, left hemisphere 113.2
1961 Female, age 42, unknown 100.8
Dorsomedial nucleus
nTPM: 131.0
1989 Male, age 62, unknown 189.9
2017 Female, age 42, unknown 102.0
2041 Female, age 72, unknown 101.1
Lateral hypothalamic area
nTPM: 140.8
1791 Male, age 80, right hemisphere 161.5
2228 Male, age 66, unknown 151.8
2271 Male, age 75, both hemispheres 150.0
2412 Male, age 62, unknown 100.1
Mammillary body
nTPM: 153.4
1923 Female, age 72, unknown 251.1
2413 Male, age 66, unknown 140.5
1834 Female, age 42, unknown 139.3
1948 Female, age 72, unknown 138.6
1945 Male, age 80, right hemisphere 97.3
Paraventricular nucleus
nTPM: 76.5
2700 Male, age 62, unknown 76.5
Preoptic area
nTPM: 100.0
1907 Male, age 80, right hemisphere 137.5
1861 Female, age 42, unknown 88.7
2414 Female, age 72, unknown 73.9
Supraoptic nucleus
nTPM: 103.5
2835 Female, age 72, unknown 143.4
1894 Female, age 72, unknown 87.6
2043 Male, age 62, unknown 79.6
Ventromedial nucleus
nTPM: 77.7
1982 Female, age 72, unknown 78.9
1822 Female, age 42, unknown 76.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

137.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 137.3
Samples: 257

Max nTPM: 1100.5
Min nTPM: 36.8
Std nTPM: 94.3
Median nTPM: 124.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 1100.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 1058.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 390.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 375.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 297.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 269.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 262.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 249.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 234.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 218.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 211.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 210.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 210.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 207.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 204.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 203.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 203.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 202.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 197.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 191.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 189.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 182.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 181.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 174.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 174.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 173.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 172.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 172.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 171.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 171.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 171.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 169.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 168.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 166.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 166.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 164.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 164.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 163.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 162.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 162.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 162.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 162.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 162.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 161.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 161.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 159.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 159.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 158.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 157.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 157.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 156.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 155.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 155.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 155.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 155.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 154.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 154.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 154.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 153.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 152.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 152.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 152.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 151.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 151.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 151.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 151.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 151.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 150.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 149.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 149.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 149.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 148.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 147.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 146.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 145.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 145.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 144.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 144.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 144.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 143.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 143.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 141.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 140.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 140.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 140.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 140.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 139.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 139.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 138.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 138.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 137.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 137.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 137.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 137.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 137.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 137.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 136.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 135.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 135.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 134.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 134.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 134.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 133.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 133.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 132.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 132.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 131.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 131.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 131.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 131.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 130.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 130.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 129.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 129.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 129.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 129.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 129.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 129.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 129.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 127.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 127.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 126.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 126.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 126.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 125.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 125.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 124.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 124.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 124.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 124.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 123.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 123.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 123.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 123.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 122.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 122.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 122.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 121.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 121.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 119.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 118.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 118.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 118.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 118.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 117.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 116.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 116.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 116.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 116.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 115.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 115.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 115.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 115.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 115.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 115.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 114.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 113.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 112.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 111.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 111.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 111.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 110.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 110.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 110.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 110.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 110.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 110.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 110.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 109.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 109.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 109.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 109.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 108.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 108.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 108.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 108.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 108.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 108.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 107.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 107.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 107.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 107.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 106.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 106.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 106.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 106.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 106.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 106.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 106.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 106.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 106.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 105.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 105.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 105.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 104.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 104.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 103.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 103.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 101.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 101.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 101.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 100.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 100.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 99.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 99.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 99.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 99.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 99.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 98.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 98.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 98.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 97.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 96.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 95.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 95.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 94.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 94.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 94.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 93.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 93.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 93.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 92.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 91.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 91.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 91.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 90.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 89.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 87.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 87.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 87.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 87.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 86.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 85.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 84.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 83.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 81.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 81.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 80.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 77.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 76.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 76.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 75.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 72.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 72.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 72.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 71.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 70.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 70.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 69.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 67.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 64.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 63.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 57.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 56.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 52.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 50.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 36.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

116.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 116.0
Samples: 4

Max nTPM: 152.3
Min nTPM: 95.1
Sample A Female 152.3
Sample B Female 116.5
Sample C Male 99.9
Sample D Male 95.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

176.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 176.2
Samples: 4

Max nTPM: 183.1
Min nTPM: 170.4
Sample A Male 170.4
Sample B Male 179.9
Sample C Female 183.1
Sample D Female 171.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

9.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 9.4
761 Antisense, RP_040324_01_F03, Mouse strain C57BL/6J (56 days, male) 9.4
760 Antisense, RP_040324_01_F03, Mouse strain C57BL/6J (56 days, male) 9.3

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