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  • SUMMARY

  • TISSUE

  • BRAIN

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  • BLOOD

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  • GFAP
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

145.980
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:5882.0 nTPM
HPA Brain:18036.9 nTPM
GTEx:5882.0 nTPM
Pig:3762.0 nTPM
Mouse:211.2 nTPM
Allen mouse:2.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody CAB000039
Hypothalamus mean intensity 145.980
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 50.804
Mammillary nucleus 18.071
Periventricular hypothalamic nucleus 105.516
Supraoptic nucleus 86.361
Tuberal nucleus 84.260
Ventral tuberomammillary nucleus -
Lateral preoptic area 23.283
Medial preoptic area 63.138
Suprachiasmatic nucleus 100.536
Paraventricular hypothalamic nucleus 52.279
Anterior hypothalamic area, central 30.290
Ventral medial hypothalamic nucleus 54.443
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 127.382
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 26.256
Dorsal medial hypothalamic nucleus 51.297
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

18036.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 3434.8
1961 Female, age 42, unknown 4140.8
2226 Male, age 75, left hemisphere 2728.8
Dorsomedial nucleus
nTPM: 7988.7
1989 Male, age 62, unknown 9359.4
2017 Female, age 42, unknown 9323.1
2041 Female, age 72, unknown 5283.5
Lateral hypothalamic area
nTPM: 7762.9
1791 Male, age 80, right hemisphere 10427.0
2412 Male, age 62, unknown 8804.6
2271 Male, age 75, both hemispheres 6451.8
2228 Male, age 66, unknown 5368.3
Mammillary body
nTPM: 8186.3
1834 Female, age 42, unknown 15091.3
2413 Male, age 66, unknown 7333.2
1945 Male, age 80, right hemisphere 7071.1
1923 Female, age 72, unknown 6426.9
1948 Female, age 72, unknown 5009.2
Paraventricular nucleus
nTPM: 7664.0
2700 Male, age 62, unknown 7664.0
Preoptic area
nTPM: 5703.3
2414 Female, age 72, unknown 6600.0
1861 Female, age 42, unknown 6221.1
1907 Male, age 80, right hemisphere 4288.7
Supraoptic nucleus
nTPM: 18036.9
2043 Male, age 62, unknown 24045.7
1894 Female, age 72, unknown 21040.7
2835 Female, age 72, unknown 9024.2
Ventromedial nucleus
nTPM: 3097.2
1822 Female, age 42, unknown 3539.7
1982 Female, age 72, unknown 2654.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

5882.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 5882.0
Samples: 257

Max nTPM: 19867.1
Min nTPM: 1123.7
Std nTPM: 3241.9
Median nTPM: 5123.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 19867.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 18222.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 16720.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 15788.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 15639.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 15216.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 13999.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 13898.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 13736.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 12719.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 12582.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 12416.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 12398.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 11626.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 11262.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 11239.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 11171.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 11069.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 11044.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 11034.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 10907.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 10902.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 10681.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 10408.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 10239.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 10238.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 10182.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 10157.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 10148.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 10008.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 9882.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 9808.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 9781.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 9638.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 9585.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 9394.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 9335.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 9289.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 9218.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 9046.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 9035.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 8942.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 8926.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 8889.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 8884.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 8859.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 8763.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 8648.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 8502.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 8494.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 8429.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 8406.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 8233.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 8077.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 7965.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 7917.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 7869.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 7608.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 7527.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 7506.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 7457.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 7448.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 7444.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 7426.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 7329.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 7315.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 7291.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 7284.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 7250.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 7234.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 7120.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 7091.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 7038.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 7034.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 7001.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 6972.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 6927.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 6844.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 6835.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 6776.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 6723.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 6700.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 6510.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 6489.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 6485.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 6422.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 6384.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 6370.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 6367.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 6308.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 6286.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 6270.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 6196.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 6175.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 6152.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 6123.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 6038.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 6020.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 5977.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 5977.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 5975.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 5914.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 5889.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 5860.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 5811.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 5764.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 5698.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 5696.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 5669.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 5647.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 5601.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 5583.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 5521.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 5520.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 5518.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 5480.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 5424.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 5375.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 5374.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 5369.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 5310.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 5305.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 5301.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 5282.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 5241.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 5186.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 5142.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 5140.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 5123.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 5096.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 5077.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 5074.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 5065.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 5027.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 4979.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 4979.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 4921.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 4911.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 4909.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 4897.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 4884.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 4847.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 4833.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 4777.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 4729.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 4693.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 4693.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 4685.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 4677.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 4637.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 4601.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 4571.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 4537.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 4526.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 4479.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 4449.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 4398.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 4397.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 4372.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 4353.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 4327.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 4307.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 4302.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 4250.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 4223.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 4187.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 4168.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 4135.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 4111.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 4108.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 4105.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 4102.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 4047.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 4037.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 4008.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 3984.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 3979.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 3958.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 3938.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 3935.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 3850.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 3842.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 3834.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 3773.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 3769.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 3700.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 3698.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 3690.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 3671.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 3663.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 3655.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 3645.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 3638.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 3624.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 3570.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 3536.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 3533.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 3527.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 3526.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 3498.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 3438.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 3366.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 3330.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 3286.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 3277.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 3259.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 3243.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 3234.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 3225.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 3182.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 3142.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 3135.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 3124.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 3119.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 3105.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 2985.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 2948.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 2927.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 2890.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 2869.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 2861.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 2821.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 2794.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 2779.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 2703.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 2662.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 2646.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 2643.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 2570.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 2523.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 2466.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 2461.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 2453.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 2445.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 2422.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 2413.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 2309.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 2286.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 2153.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 2153.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 2123.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 2102.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 1974.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 1937.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 1916.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 1903.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 1827.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 1774.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 1742.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 1718.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 1577.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 1523.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 1502.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 1377.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 1305.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 1195.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 1123.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3762.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 3762.0
Samples: 4

Max nTPM: 5793.6
Min nTPM: 2249.3
Sample A Female 3429.3
Sample B Female 5793.6
Sample C Male 3575.9
Sample D Male 2249.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

211.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 211.2
Samples: 4

Max nTPM: 263.0
Min nTPM: 188.2
Sample A Male 204.1
Sample B Male 188.2
Sample C Female 189.6
Sample D Female 263.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.9
1357 Antisense, RP_Baylor_253913, Mouse strain C57BL/6J (56 days, male) 3.4
79591671 Antisense, RP_071204_04_G06, Mouse strain C57BL/6J (56 days, male) 2.5
1358 Antisense, RP_Baylor_253913, Mouse strain C57BL/6J (56 days, male) 2.3
79913385 Antisense, RP_071204_04_G06, Mouse strain C57BL/6J (56 days, male) 1.2

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