RPL27
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • IMMUNE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
  • METABOLIC
  • ISOFORM
  • EVOLUTIONARY
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • AI IMPLEMENTATIONS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Tissue
Category
Tau score
Tissue
Category
Tau score
Cluster
Reliability
Region
Niche
Category
Brain region
Category
Tau score
Brain domain
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Cell type
Category
Tau score
Cell type group
Category
Tau score
Single cell
Category
Tau score
Single cell
Category
Tau score
Annotation
Annotation
Annotation
Tissue
Cell type
Enrichment
Cluster
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Regulation
Cancer
Regulation
Cancer
Category
Cancer
Category
Tau score
Correlation
Correlation
Cancer
Category
Tau score
Cluster
Variants
Source
PTM
ipTM
Interacting gene (ensg_id)
Type
Number of interactions
Type
Heterodimer
Subsystem
Isoforms
Specificity
Expression
Species
Ortholog
Type
Species
Tissue
Category
Species
Tau score
Data
Category
Data
Species
Category
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • METABOLIC

  • ISOFORM

  • EVOLUTION

  • RPL27
IMMUNE CELL B-CELLS Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
B-cells
Immune cell methods
B-CELLS - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:3067.1 nTPM
Monaco:458.6 nTPM
Schmiedel:1316.0 TPM

B-CELLS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

3067.1
HPA sample nTPM
Memory B-cell
nTPM: 3067.1
Samples: 6

Max nTPM: 3939.6
Min nTPM: 2283.5
P10809_1017 2655.5
P10809_1025 3437.8
P10809_1044 2283.5
P10809_1063 3187.7
P10809_1092 2898.4
P10809_1105 3939.6
Naive B-cell
nTPM: 2804.1
Samples: 6

Max nTPM: 3694.3
Min nTPM: 2145.5
P10809_1011 2291.3
P10809_1029 2876.0
P10809_1048 2145.5
P10809_1067 3122.5
P10809_1091 2694.9
P10809_1104 3694.3

B-CELLS - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

458.6
Monaco sample nTPM
Exhausted memory B-cell
nTPM: 458.6
Samples: 4

Max nTPM: 760.4
Min nTPM: 136.5
RHH5310_R3677 343.1
RHH5218_R3590 136.5
RHH5247_R3619 760.4
RHH5276_R3648 594.4
Naive B-cell
nTPM: 428.6
Samples: 4

Max nTPM: 801.7
Min nTPM: 129.1
RHH5308_R3675 434.9
RHH5216_R3588 129.1
RHH5245_R3617 801.7
RHH5274_R3646 348.8
Non-switched memory B-cell
nTPM: 320.6
Samples: 4

Max nTPM: 597.0
Min nTPM: 153.0
RHH5309_R3676 369.0
RHH5217_R3589 163.5
RHH5246_R3618 153.0
RHH5275_R3647 597.0
Plasmablast
nTPM: 360.1
Samples: 4

Max nTPM: 502.8
Min nTPM: 207.6
RHH5312_R3679 405.8
RHH5220_R3592 207.6
RHH5249_R3621 324.2
RHH5278_R3650 502.8
Switched memory B-cell
nTPM: 311.3
Samples: 4

Max nTPM: 483.8
Min nTPM: 187.9
RHH5311_R3678 339.2
RHH5219_R3591 234.4
RHH5248_R3620 187.9
RHH5277_R3649 483.8

B-CELLS - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

1316.0
Schmiedel sample id TPM
Naive B-cell
TPM: 1316.0
Samples: 91

Max TPM: 1647.7
Min TPM: 812.6
B_CELL_NAIVE_1 1647.7
B_CELL_NAIVE_2 1569.0
B_CELL_NAIVE_3 1557.7
B_CELL_NAIVE_4 1554.2
B_CELL_NAIVE_5 1549.0
B_CELL_NAIVE_6 1540.4
B_CELL_NAIVE_7 1536.3
B_CELL_NAIVE_8 1523.7
B_CELL_NAIVE_9 1511.7
B_CELL_NAIVE_10 1504.0
B_CELL_NAIVE_11 1493.7
B_CELL_NAIVE_12 1493.0
B_CELL_NAIVE_13 1485.1
B_CELL_NAIVE_14 1476.7
B_CELL_NAIVE_15 1459.8
B_CELL_NAIVE_16 1458.3
B_CELL_NAIVE_17 1451.3
B_CELL_NAIVE_18 1443.0
B_CELL_NAIVE_19 1439.4
B_CELL_NAIVE_20 1435.6
B_CELL_NAIVE_21 1430.7
B_CELL_NAIVE_22 1422.8
B_CELL_NAIVE_23 1418.9
B_CELL_NAIVE_24 1417.0
B_CELL_NAIVE_25 1406.0
B_CELL_NAIVE_26 1405.6
B_CELL_NAIVE_27 1405.4
B_CELL_NAIVE_28 1403.0
B_CELL_NAIVE_29 1387.0
B_CELL_NAIVE_30 1385.1
B_CELL_NAIVE_31 1384.4
B_CELL_NAIVE_32 1383.8
B_CELL_NAIVE_33 1383.7
B_CELL_NAIVE_34 1383.5
B_CELL_NAIVE_35 1380.0
B_CELL_NAIVE_36 1369.2
B_CELL_NAIVE_37 1352.2
B_CELL_NAIVE_38 1350.9
B_CELL_NAIVE_39 1350.6
B_CELL_NAIVE_40 1345.4
B_CELL_NAIVE_41 1343.3
B_CELL_NAIVE_42 1342.2
B_CELL_NAIVE_43 1342.1
B_CELL_NAIVE_44 1336.3
B_CELL_NAIVE_45 1324.9
B_CELL_NAIVE_46 1322.9
B_CELL_NAIVE_47 1320.3
B_CELL_NAIVE_48 1316.7
B_CELL_NAIVE_49 1315.8
B_CELL_NAIVE_50 1308.9
B_CELL_NAIVE_51 1306.9
B_CELL_NAIVE_52 1305.3
B_CELL_NAIVE_53 1302.2
B_CELL_NAIVE_54 1301.9
B_CELL_NAIVE_55 1301.1
B_CELL_NAIVE_56 1299.0
B_CELL_NAIVE_57 1298.5
B_CELL_NAIVE_58 1296.7
B_CELL_NAIVE_59 1289.0
B_CELL_NAIVE_60 1286.4
B_CELL_NAIVE_61 1278.4
B_CELL_NAIVE_62 1277.1
B_CELL_NAIVE_63 1275.8
B_CELL_NAIVE_64 1275.6
B_CELL_NAIVE_65 1271.6
B_CELL_NAIVE_66 1269.3
B_CELL_NAIVE_67 1259.1
B_CELL_NAIVE_68 1252.6
B_CELL_NAIVE_69 1238.0
B_CELL_NAIVE_70 1234.7
B_CELL_NAIVE_71 1232.2
B_CELL_NAIVE_72 1226.9
B_CELL_NAIVE_73 1226.7
B_CELL_NAIVE_74 1225.9
B_CELL_NAIVE_75 1195.8
B_CELL_NAIVE_76 1195.2
B_CELL_NAIVE_77 1180.6
B_CELL_NAIVE_78 1166.1
B_CELL_NAIVE_79 1148.2
B_CELL_NAIVE_80 1140.3
B_CELL_NAIVE_81 1138.6
B_CELL_NAIVE_82 1097.5
B_CELL_NAIVE_83 1078.4
B_CELL_NAIVE_84 1075.0
B_CELL_NAIVE_85 1060.8
B_CELL_NAIVE_86 1014.1
B_CELL_NAIVE_87 988.0
B_CELL_NAIVE_88 976.1
B_CELL_NAIVE_89 924.5
B_CELL_NAIVE_90 864.6
B_CELL_NAIVE_91 812.6
Show allShow less

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut and Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.