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  • SUMMARY

  • TISSUE

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  • DNAJB1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:159.3 nTPM
HPA Brain:128.8 nTPM
GTEx:159.3 nTPM
Pig:47.8 nTPM
Mouse:33.2 nTPM
Allen mouse:5.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

128.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 111.2
2226 Male, age 75, left hemisphere 125.7
1961 Female, age 42, unknown 96.8
Dorsomedial nucleus
nTPM: 113.0
2041 Female, age 72, unknown 136.6
1989 Male, age 62, unknown 105.9
2017 Female, age 42, unknown 96.5
Lateral hypothalamic area
nTPM: 111.8
1791 Male, age 80, right hemisphere 116.6
2228 Male, age 66, unknown 112.4
2271 Male, age 75, both hemispheres 112.2
2412 Male, age 62, unknown 106.2
Mammillary body
nTPM: 110.8
1923 Female, age 72, unknown 124.6
2413 Male, age 66, unknown 114.7
1945 Male, age 80, right hemisphere 108.6
1834 Female, age 42, unknown 105.4
1948 Female, age 72, unknown 100.8
Paraventricular nucleus
nTPM: 97.5
2700 Male, age 62, unknown 97.5
Preoptic area
nTPM: 108.4
1861 Female, age 42, unknown 112.7
1907 Male, age 80, right hemisphere 106.7
2414 Female, age 72, unknown 105.8
Supraoptic nucleus
nTPM: 128.8
2043 Male, age 62, unknown 143.5
2835 Female, age 72, unknown 126.1
1894 Female, age 72, unknown 116.8
Ventromedial nucleus
nTPM: 103.8
1982 Female, age 72, unknown 106.0
1822 Female, age 42, unknown 101.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

159.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 159.3
Samples: 257

Max nTPM: 2513.0
Min nTPM: 35.7
Std nTPM: 240.1
Median nTPM: 80.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 2513.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 1631.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 1330.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 993.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 792.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 748.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 710.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 707.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 691.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 653.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 598.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 581.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 576.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 521.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 488.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 448.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 431.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 428.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 424.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 422.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 403.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 386.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 350.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 343.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 334.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 333.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 327.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 319.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 312.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 299.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 294.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 293.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 285.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 280.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 275.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 266.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 265.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 263.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 252.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 251.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 251.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 246.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 242.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 228.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 225.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 222.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 207.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 207.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 206.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 205.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 203.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 195.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 188.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 187.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 185.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 175.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 172.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 170.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 167.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 158.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 153.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 152.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 147.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 145.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 143.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 142.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 140.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 137.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 137.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 129.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 129.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 129.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 127.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 127.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 126.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 123.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 122.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 120.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 120.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 119.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 116.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 115.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 114.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 114.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 108.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 104.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 104.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 102.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 102.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 101.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 101.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 99.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 97.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 97.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 96.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 96.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 95.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 95.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 95.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 94.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 94.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 93.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 93.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 92.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 91.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 91.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 89.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 88.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 88.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 88.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 88.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 88.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 87.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 87.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 86.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 86.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 86.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 86.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 84.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 84.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 84.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 84.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 83.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 83.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 83.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 82.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 82.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 81.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 80.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 80.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 80.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 79.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 78.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 78.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 77.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 77.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 76.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 76.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 76.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 75.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 75.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 75.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 74.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 74.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 73.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 73.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 73.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 73.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 72.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 72.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 72.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 72.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 72.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 72.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 71.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 71.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 71.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 71.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 71.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 70.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 70.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 69.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 69.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 69.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 69.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 68.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 68.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 67.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 67.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 67.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 67.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 66.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 65.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 65.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 64.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 64.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 63.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 63.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 63.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 63.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 62.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 62.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 62.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 62.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 62.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 62.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 62.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 62.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 61.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 61.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 61.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 61.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 61.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 61.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 61.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 60.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 60.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 60.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 60.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 60.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 60.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 59.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 59.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 58.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 58.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 58.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 57.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 57.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 57.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 56.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 56.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 56.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 55.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 54.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 54.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 54.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 54.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 54.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 53.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 53.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 53.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 53.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 53.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 52.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 52.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 52.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 52.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 52.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 51.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 51.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 51.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 51.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 51.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 51.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 50.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 50.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 50.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 50.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 50.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 49.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 49.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 49.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 49.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 48.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 48.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 47.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 46.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 44.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 44.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 43.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 43.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 43.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 41.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 40.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 40.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 37.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 35.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

47.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 47.8
Samples: 4

Max nTPM: 53.1
Min nTPM: 43.2
Sample A Female 53.1
Sample B Female 43.5
Sample C Male 51.5
Sample D Male 43.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

33.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 33.2
Samples: 4

Max nTPM: 37.4
Min nTPM: 30.6
Sample A Male 30.6
Sample B Male 37.4
Sample C Female 33.6
Sample D Female 31.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 5.1
71836748 Antisense, RP_051017_02_A03, Mouse strain C57BL/6J (56 days, male) 8.5
68269050 Antisense, RP_041208_01_G01, Mouse strain C57BL/6J (56 days, male) 1.6

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