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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • RAMP1
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:103.3 nTPM
GTEx:184.1 nTPM
FANTOM5:51.9 Scaled Tags Per Million
Macaque:34.1 nTPM
Pig:220.4 nTPM

PUTAMEN - Annotated protein expression
Pending normal tissue analysis

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

103.3
Sample id Sample description nTPM
Putamen
nTPM: 103.3
1838 Male, age 80, right hemisphere 121.4
2489 Female, age 72, unknown 108.8
2647 Male, age 75, left hemisphere 108.8
1937 Female, age 91, right hemisphere 103.4
2482 Female, age 94, left hemisphere 100.9
2466 Female, age 79, unknown 94.8
1829 Male, age 74, unknown 85.0

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

184.1
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 184.1
Samples: 254

Max nTPM: 514.2
Min nTPM: 83.2
Std nTPM: 63.2
Median nTPM: 169.9
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 514.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 419.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 417.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 369.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 367.0
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 359.9
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 336.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 334.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 317.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 309.8
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 309.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 309.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 306.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 298.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 298.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 298.5
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 297.1
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 294.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 287.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 282.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 278.5
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 275.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 272.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 271.7
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 269.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 267.8
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 267.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 263.5
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 263.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 262.6
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 260.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 257.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 251.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 247.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 246.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 246.3
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 245.9
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 245.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 243.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 240.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 239.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 236.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 233.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 232.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 232.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 231.4
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 231.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 227.0
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 224.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 224.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 223.2
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 221.4
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 220.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 220.0
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 217.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 215.4
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 215.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 214.9
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 212.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 212.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 211.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 211.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 210.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 210.1
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 209.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 209.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 208.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 207.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 205.8
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 204.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 204.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 204.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 204.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 204.1
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 203.8
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 202.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 202.0
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 202.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 201.9
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 201.7
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 201.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 200.8
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 200.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 199.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 198.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 197.6
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 194.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 194.6
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 193.7
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 193.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 193.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 192.9
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 192.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 191.9
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 190.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 190.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 187.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 186.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 186.0
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 185.5
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 185.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 185.3
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 185.1
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 185.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 184.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 183.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 183.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 181.9
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 181.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 180.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 180.3
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 179.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 178.4
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 178.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 178.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 177.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 176.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 175.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 175.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 174.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 174.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 174.1
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 173.1
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 171.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 171.2
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 170.3
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 170.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 169.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 169.6
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 169.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 168.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 168.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 167.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 167.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 166.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 166.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 166.6
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 166.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 166.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 165.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 165.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 164.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 164.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 164.0
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 164.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 163.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 162.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 162.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 161.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 160.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 160.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 158.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 158.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 158.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 157.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 156.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 155.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 155.5
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 154.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 154.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 154.7
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 154.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 153.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 153.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 152.9
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 152.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 152.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 151.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 151.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 151.0
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 150.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 149.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 149.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 148.9
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 147.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 147.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 147.0
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 146.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 145.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 145.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 144.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 143.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 143.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 142.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 142.3
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 142.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 142.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 140.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 140.9
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 140.7
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 140.6
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 139.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 138.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 138.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 137.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 137.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 137.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 137.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 136.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 136.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 136.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 136.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 135.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 134.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 134.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 133.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 133.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 131.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 131.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 130.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 130.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 130.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 130.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 129.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 128.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 128.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 126.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 125.9
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 125.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 125.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 125.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 124.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 124.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 123.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 122.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 122.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 122.1
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 121.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 121.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 119.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 119.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 114.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 114.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 114.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 112.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 111.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 111.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 110.9
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 108.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 108.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 108.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 106.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 105.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 105.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 105.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 105.0
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 100.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 99.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 99.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 97.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 96.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 92.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 86.0
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 83.2
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

51.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 51.9
FF:10176-103C5 60 years, female 51.9

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34.1
Macaque sample Sample description nTPM
Putamen
nTPM: 34.1
Samples: 2

Max nTPM: 36.8
Min nTPM: 31.4
Sample A 31.4
Sample B 36.8

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

220.4
Pig sample Sample description nTPM
Putamen
nTPM: 220.4
Samples: 3

Max nTPM: 239.6
Min nTPM: 185.5
Sample B Female 185.5
Sample C Male 239.6
Sample D Male 236.2

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