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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • H3-3B
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN35 EYE3 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT10 LIVER & GALLBLADDER2 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM8 BREAST & FEMALE REPRODUCTIVE SYSTEM7 MUSCLE & VASCULAR TISSUE11 CONNECTIVE & SOFT TISSUE11 SKIN3 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL SPINAL CORD ENTORHINAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL CORTEX
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD
CORNEA LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (UPPER)
GALLBLADDER LIVER
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS PENIS PROSTATE SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA VAGINA
AORTA BLOOD VESSEL HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE DURA MATER EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:257.8 nTPM
GTEx:329.7 nTPM
FANTOM5:217.6 Scaled Tags Per Million
Pig:7.0 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

257.8
Sample id Sample description nTPM
Putamen
nTPM: 257.8
2482 Female, age 94, left hemisphere 357.3
1937 Female, age 91, right hemisphere 279.8
2466 Female, age 79, unknown 243.9
1838 Male, age 80, right hemisphere 242.0
2489 Female, age 72, unknown 241.8
1829 Male, age 74, unknown 229.4
2647 Male, age 75, left hemisphere 210.2

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

329.7
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 329.7
Samples: 254

Max nTPM: 961.1
Min nTPM: 186.8
Std nTPM: 115.1
Median nTPM: 298.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 961.1
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 897.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 850.6
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 847.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 739.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 732.0
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 712.9
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 626.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 624.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 586.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 564.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 564.1
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 549.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 545.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 534.6
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 527.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 511.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 502.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 490.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 480.9
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 480.5
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 461.2
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 456.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 446.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 438.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 437.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 431.2
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 430.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 429.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 427.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 425.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 414.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 414.8
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 408.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 408.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 407.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 406.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 406.6
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 395.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 394.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 389.5
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 384.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 383.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 383.4
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 382.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 382.8
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 382.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 381.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 381.1
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 374.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 374.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 372.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 372.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 372.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 371.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 366.6
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 362.0
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 361.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 360.8
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 360.0
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 360.0
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 359.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 358.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 357.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 357.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 355.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 355.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 354.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 353.6
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 353.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 353.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 351.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 345.6
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 344.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 342.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 341.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 341.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 341.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 338.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 338.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 338.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 337.9
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 336.0
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 334.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 333.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 332.6
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 332.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 332.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 332.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 331.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 331.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 330.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 327.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 327.6
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 327.4
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 326.6
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 324.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 323.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 323.8
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 322.3
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 322.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 322.1
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 321.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 321.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 319.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 318.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 318.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 317.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 317.0
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 317.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 316.6
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 315.9
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 314.2
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 313.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 312.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 312.4
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 311.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 311.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 311.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 310.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 310.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 308.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 306.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 302.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 300.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 300.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 298.8
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 297.4
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 297.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 295.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 295.3
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 294.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 294.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 293.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 292.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 292.4
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 292.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 292.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 291.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 290.5
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 290.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 289.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 288.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 288.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 287.4
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 287.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 286.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 285.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 284.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 284.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 284.1
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 283.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 283.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 283.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 282.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 282.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 280.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 280.0
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 279.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 278.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 278.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 277.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 277.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 277.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 276.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 276.5
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 274.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 273.6
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 273.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 272.8
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 272.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 272.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 272.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 271.1
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 270.5
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 270.5
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 269.9
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 269.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 269.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 268.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 268.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 267.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 267.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 266.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 264.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 264.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 263.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 263.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 263.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 263.2
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 263.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 262.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 262.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 261.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 261.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 260.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 258.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 258.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 258.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 257.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 257.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 256.8
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 255.6
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 255.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 253.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 252.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 252.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 252.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 250.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 250.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 249.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 249.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 248.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 247.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 246.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 245.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 244.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 244.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 242.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 242.6
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 241.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 241.4
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 240.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 239.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 238.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 238.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 235.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 235.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 234.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 233.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 233.1
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 232.1
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 231.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 229.5
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 228.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 227.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 227.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 226.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 225.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 225.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 224.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 224.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 222.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 218.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 214.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 214.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 213.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 204.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 202.3
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 201.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 199.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 193.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 190.1
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 186.8
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

217.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 217.6
FF:10176-103C5 60 years, female 217.6

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

7.0
Pig sample Sample description nTPM
Putamen
nTPM: 7.0
Samples: 3

Max nTPM: 10.0
Min nTPM: 3.9
Sample B Female 10.0
Sample C Male 3.9
Sample D Male 7.0

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