HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:2202.1 nTPM
HPA Brain:810.8 nTPM
GTEx:2202.1 nTPM
FANTOM5:774.5 Scaled Tags Per Million
Pig:1379.1 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039437Antibody HPA073929Antibody CAB008364
Glial cells Not detectedNot detectedNot detected
Neuronal cells MediumHighMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 810.8
Sample id Sample description nTPM
Hippocampus
nTPM: 810.8
1898 Male, age 80, left hemisphere 926.6
1855 Male, age 76, left hemisphere 902.2
2621 Female, age 67, right hemisphere 881.7
1911 Female, age 85, right hemisphere 787.4
2529 Female, age 94, left hemisphere 760.5
2148 Female, age 91, left hemisphere 606.3
Dentate gyrus
nTPM: 769.9
2010 Male, age 76, both hemispheres 964.8
2530 Female, age 94, left hemisphere 956.4
1927 Female, age 91, both hemispheres 754.4
2246 Female, age 85, both hemispheres 743.7
2531 Female, age 67, both hemispheres 641.8
2528 Male, age 74, both hemispheres 558.1
Entorhinal gyrus
nTPM: 633.0
2686 Male, age 75, right hemisphere 775.8
2117 Female, age 91, right hemisphere 719.6
1787 Male, age 76, left hemisphere 708.9
1938 Female, age 85, left hemisphere 604.9
2764 Male, age 80, right hemisphere 535.4
2613 Female, age 94, left hemisphere 453.3
Hippocampus, CA1
nTPM: 755.8
2045 Male, age 76, both hemispheres 988.0
1873 Female, age 85, both hemispheres 821.6
2749 Male, age 80, left hemisphere 686.1
2082 Female, age 91, right hemisphere 657.0
2527 Male, age 74, both hemispheres 626.5
Hippocampus, CA2
nTPM: 791.9
1892 Male, age 76, both hemispheres 1017.6
1940 Female, age 85, left hemisphere 841.6
1963 Male, age 80, left hemisphere 839.4
2437 Female, age 94, left hemisphere 699.4
2249 Male, age 74, both hemispheres 693.3
2113 Female, age 91, right hemisphere 660.2
Hippocampus, CA3
nTPM: 693.3
1867 Male, age 76, both hemispheres 1100.6
1891 Female, age 85, both hemispheres 787.9
2436 Male, age 74, both hemispheres 639.6
2137 Male, age 80, left hemisphere 599.7
2861 Female, age 67, both hemispheres 595.1
2620 Female, age 94, left hemisphere 436.5
Parahippocampal cortex
nTPM: 623.3
2018 Male, age 76, both hemispheres 976.2
2250 Female, age 67, right hemisphere 657.6
1850 Male, age 80, both hemispheres 624.7
2245 Female, age 91, both hemispheres 620.8
2532 Female, age 72, left hemisphere 618.4
1990 Female, age 91, right hemisphere 605.3
1933 Female, age 85, both hemispheres 595.7
2692 Male, age 74, both hemispheres 584.5
2693 Female, age 94, both hemispheres 490.1
2622 Female, age 67, right hemisphere 460.1
Perirhinal gyrus
nTPM: 603.8
1841 Female, age 85, right hemisphere 663.2
1847 Female, age 91, left hemisphere 661.4
2848 Male, age 76, right hemisphere 580.0
2521 Female, age 94, right hemisphere 568.7
1794 Male, age 80, right hemisphere 546.0
Subiculum
nTPM: 742.4
2042 Male, age 76, both hemispheres 990.6
2438 Female, age 94, left hemisphere 781.8
1901 Male, age 80, both hemispheres 716.6
2729 Female, age 91, right hemisphere 710.1
1977 Female, age 85, both hemispheres 675.1
2619 Male, age 74, both hemispheres 579.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 2202.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 2202.1
Samples: 255

Max nTPM: 5707.1
Min nTPM: 969.0
Std nTPM: 655.4
Median nTPM: 2032.3
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 5707.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 4835.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 4501.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 4252.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 4164.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 3731.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 3716.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 3674.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 3613.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 3596.0
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 3528.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 774.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 774.5
FF:10169-103B7 60 years, female 815.2
FF:10153-102I9 76 years, female 733.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 1379.1
Pig sample Sample description nTPM
Subiculum
nTPM: 1110.2
Samples: 4

Max nTPM: 1471.2
Min nTPM: 875.1
Sample A Female 1471.2
Sample B Female 983.8
Sample C Male 875.1
Sample D Male 1110.6
Dorsal hippocampus
nTPM: 1379.1
Samples: 4

Max nTPM: 1859.5
Min nTPM: 947.5
Sample A Female 1859.5
Sample B Female 1132.4
Sample C Male 1577.1
Sample D Male 947.5
Entorhinal cortex
nTPM: 1089.8
Samples: 4

Max nTPM: 1258.3
Min nTPM: 852.6
Sample A Female 1060.4
Sample B Female 1258.3
Sample C Male 1187.9
Sample D Male 852.6
Ventral hippocampus
nTPM: 1081.7
Samples: 4

Max nTPM: 1227.3
Min nTPM: 903.4
Sample A Female 1124.4
Sample B Female 903.4
Sample C Male 1071.8
Sample D Male 1227.3

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