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  • SUMMARY

  • TISSUE

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  • TPT1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1771.5 nTPM
HPA Brain:1392.8 nTPM
GTEx:1771.5 nTPM
Pig:1369.6 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1392.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 653.9
2226 Male, age 75, left hemisphere 702.5
1961 Female, age 42, unknown 605.2
Dorsomedial nucleus
nTPM: 715.9
2041 Female, age 72, unknown 789.2
2017 Female, age 42, unknown 705.7
1989 Male, age 62, unknown 652.9
Lateral hypothalamic area
nTPM: 995.6
2228 Male, age 66, unknown 1029.6
2412 Male, age 62, unknown 1016.9
2271 Male, age 75, both hemispheres 973.3
1791 Male, age 80, right hemisphere 962.7
Mammillary body
nTPM: 1032.6
1834 Female, age 42, unknown 1123.1
1948 Female, age 72, unknown 1026.0
1945 Male, age 80, right hemisphere 1020.7
1923 Female, age 72, unknown 1005.6
2413 Male, age 66, unknown 987.7
Paraventricular nucleus
nTPM: 1066.3
2700 Male, age 62, unknown 1066.3
Preoptic area
nTPM: 755.1
2414 Female, age 72, unknown 851.2
1861 Female, age 42, unknown 836.8
1907 Male, age 80, right hemisphere 577.2
Supraoptic nucleus
nTPM: 1392.8
1894 Female, age 72, unknown 1498.6
2043 Male, age 62, unknown 1455.7
2835 Female, age 72, unknown 1224.1
Ventromedial nucleus
nTPM: 661.2
1982 Female, age 72, unknown 675.7
1822 Female, age 42, unknown 646.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1771.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 1771.5
Samples: 257

Max nTPM: 5482.5
Min nTPM: 825.6
Std nTPM: 671.5
Median nTPM: 1604.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 5482.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 5115.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 3998.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 3861.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 3766.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 3658.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 3603.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 3546.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 3356.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 3302.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 3284.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 3251.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 3164.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 2949.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 2927.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 2841.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 2809.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 2777.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 2711.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 2697.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 2690.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 2647.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 2637.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 2630.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 2630.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 2597.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 2591.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 2578.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 2561.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 2529.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 2505.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 2498.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 2488.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 2471.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 2435.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 2387.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 2369.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 2356.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 2353.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 2324.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 2321.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 2312.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 2266.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 2249.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 2242.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 2234.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 2233.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 2212.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 2197.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 2181.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 2141.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 2134.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 2133.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 2130.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 2123.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 2121.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 2120.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 2114.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 2103.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 2102.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 2099.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 2065.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 2054.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 2042.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 2037.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 2025.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 2024.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 2006.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 2006.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 1997.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 1990.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 1971.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 1955.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 1930.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 1924.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 1907.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 1902.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 1879.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 1878.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 1869.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 1851.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 1836.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 1836.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 1831.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 1829.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 1820.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 1817.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 1812.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 1811.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 1802.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 1802.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 1796.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 1792.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 1791.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 1787.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 1770.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 1760.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 1759.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 1757.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 1756.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 1755.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 1754.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 1747.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 1744.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 1743.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 1732.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 1727.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 1727.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 1721.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 1718.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 1715.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 1708.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 1707.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 1707.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 1704.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 1704.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 1701.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 1691.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 1687.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 1680.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 1677.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 1676.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 1674.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 1663.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 1659.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 1633.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 1630.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 1618.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 1604.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 1598.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 1594.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 1593.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 1592.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 1581.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 1575.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 1574.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 1572.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 1569.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 1569.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 1563.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 1563.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 1558.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 1549.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 1548.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 1548.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 1545.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 1542.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 1531.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 1528.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 1525.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 1517.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 1509.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 1509.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 1507.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 1507.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 1499.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 1496.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 1496.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 1490.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 1489.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 1479.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 1479.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 1474.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 1471.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 1467.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 1463.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 1463.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 1462.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 1448.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 1439.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 1437.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 1431.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 1431.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 1426.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 1419.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 1418.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 1410.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 1407.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 1404.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 1398.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 1397.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 1397.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 1392.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 1381.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 1367.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 1366.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 1364.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 1362.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 1360.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 1357.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 1346.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 1342.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 1339.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 1337.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 1336.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 1332.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 1330.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 1323.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 1313.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 1308.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 1301.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 1293.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 1286.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 1278.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 1277.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 1276.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 1264.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 1259.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 1258.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 1256.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 1247.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 1235.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 1229.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 1215.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 1206.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 1205.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 1204.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 1203.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 1196.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 1173.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 1167.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 1164.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 1160.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 1160.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 1159.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 1157.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 1142.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 1138.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 1134.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 1132.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 1124.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 1124.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 1112.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 1089.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 1088.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 1088.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 1084.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 1078.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 1074.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 1064.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 1060.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 1040.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 1037.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 1014.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 1014.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 996.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 977.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 970.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 966.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 962.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 951.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 948.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 935.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 903.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 886.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 849.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 825.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1369.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 1369.6
Samples: 4

Max nTPM: 1756.3
Min nTPM: 968.1
Sample A Female 1756.3
Sample B Female 1427.2
Sample C Male 1326.7
Sample D Male 968.1

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