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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:298.7 nTPM
HPA Brain:538.1 nTPM
GTEx:298.7 nTPM
Pig:123.4 nTPM
Mouse:387.8 nTPM
Allen mouse:18.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

538.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 538.1
2226 Male, age 75, left hemisphere 633.4
1961 Female, age 42, unknown 442.8
Dorsomedial nucleus
nTPM: 398.6
2041 Female, age 72, unknown 504.2
2017 Female, age 42, unknown 358.1
1989 Male, age 62, unknown 333.5
Lateral hypothalamic area
nTPM: 470.5
2271 Male, age 75, both hemispheres 514.4
1791 Male, age 80, right hemisphere 508.0
2228 Male, age 66, unknown 491.7
2412 Male, age 62, unknown 368.1
Mammillary body
nTPM: 353.9
1923 Female, age 72, unknown 437.0
2413 Male, age 66, unknown 380.0
1948 Female, age 72, unknown 327.2
1945 Male, age 80, right hemisphere 320.0
1834 Female, age 42, unknown 305.1
Paraventricular nucleus
nTPM: 431.2
2700 Male, age 62, unknown 431.2
Preoptic area
nTPM: 383.0
1907 Male, age 80, right hemisphere 441.3
1861 Female, age 42, unknown 356.5
2414 Female, age 72, unknown 351.1
Supraoptic nucleus
nTPM: 436.1
1894 Female, age 72, unknown 477.4
2835 Female, age 72, unknown 429.0
2043 Male, age 62, unknown 402.0
Ventromedial nucleus
nTPM: 494.4
1982 Female, age 72, unknown 510.2
1822 Female, age 42, unknown 478.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

298.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 298.7
Samples: 257

Max nTPM: 595.6
Min nTPM: 152.5
Std nTPM: 75.6
Median nTPM: 283.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 595.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 539.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 519.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 515.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 494.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 493.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 484.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 483.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 480.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 473.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 467.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 458.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 449.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 448.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 448.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 447.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 443.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 440.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 438.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 422.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 420.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 411.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 408.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 398.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 397.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 394.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 392.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 390.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 388.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 386.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 382.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 382.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 381.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 377.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 376.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 375.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 371.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 368.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 368.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 366.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 364.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 364.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 364.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 362.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 360.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 360.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 358.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 358.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 356.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 354.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 351.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 350.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 349.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 349.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 349.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 348.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 344.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 343.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 341.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 341.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 340.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 338.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 338.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 336.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 336.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 336.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 335.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 335.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 334.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 333.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 332.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 331.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 330.3
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 330.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 329.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 328.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 328.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 326.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 325.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 325.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 322.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 321.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 319.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 319.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 319.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 319.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 317.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 317.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 317.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 315.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 315.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 315.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 314.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 314.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 313.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 311.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 310.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 310.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 309.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 309.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 309.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 309.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 307.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 306.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 305.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 304.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 303.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 303.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 302.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 300.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 297.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 297.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 297.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 296.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 296.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 295.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 293.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 293.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 293.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 293.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 293.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 291.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 290.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 290.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 288.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 287.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 285.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 285.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 283.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 283.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 282.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 282.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 282.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 282.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 281.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 281.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 281.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 280.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 279.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 278.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 277.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 275.9
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 275.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 274.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 273.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 273.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 273.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 273.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 272.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 271.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 270.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 270.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 269.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 269.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 269.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 268.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 268.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 267.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 267.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 267.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 265.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 265.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 264.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 264.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 264.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 264.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 261.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 260.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 260.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 259.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 259.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 259.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 258.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 257.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 256.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 256.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 255.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 255.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 255.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 254.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 253.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 253.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 252.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 252.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 252.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 252.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 251.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 251.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 251.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 251.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 248.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 247.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 247.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 246.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 246.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 246.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 246.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 246.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 246.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 243.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 241.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 241.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 240.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 239.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 238.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 238.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 238.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 237.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 235.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 234.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 233.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 233.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 232.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 231.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 229.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 229.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 229.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 228.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 227.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 227.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 227.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 226.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 225.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 224.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 223.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 222.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 221.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 221.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 220.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 220.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 220.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 217.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 215.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 214.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 214.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 212.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 212.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 211.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 209.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 206.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 206.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 201.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 200.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 198.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 189.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 188.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 185.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 181.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 180.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 175.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 174.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 174.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 174.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 169.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 163.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 155.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 152.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

123.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 123.4
Samples: 4

Max nTPM: 138.7
Min nTPM: 109.4
Sample A Female 138.7
Sample B Female 119.4
Sample C Male 126.0
Sample D Male 109.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

387.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 387.8
Samples: 4

Max nTPM: 423.2
Min nTPM: 359.3
Sample A Male 384.6
Sample B Male 423.2
Sample C Female 384.2
Sample D Female 359.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

18.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 18.2
686217 Antisense, RP_040916_01_C03, Mouse strain C57BL/6J (56 days, male) 19.6
70743884 Antisense, RP_050725_01_H08, Mouse strain C57BL/6J (56 days, male) 16.7

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