A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1951.5
nTPM
Monaco:
191.8
nTPM
Schmiedel:
93.9
TPM
NK-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
1951.5
HPA sample
nTPM
NK-cell nTPM: 1951.5
Samples: 6
Max nTPM: 2447.7
Min nTPM: 1086.1
P10809_1013
1779.4
P10809_1033
2118.1
P10809_1052
2155.4
P10809_1071
2447.7
P10809_1093
1086.1
P10809_1103
2122.1
NK-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
191.8
Monaco sample
nTPM
NK-cell nTPM: 191.8
Samples: 4
Max nTPM: 217.5
Min nTPM: 160.6
RHH5316_R3683
197.5
RHH5224_R3596
160.6
RHH5253_R3625
217.5
RHH5282_R3654
191.6
NK-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
93.9
Schmiedel sample id
TPM
NK-cell TPM: 93.9
Samples: 90
Max TPM: 134.0
Min TPM: 64.0
NK_1
134.0
NK_2
133.5
NK_3
131.4
NK_4
124.9
NK_5
120.5
NK_6
118.9
NK_7
118.5
NK_8
117.3
NK_9
117.0
NK_10
114.6
NK_11
113.7
NK_12
112.0
NK_13
111.3
NK_14
111.2
NK_15
110.5
NK_16
110.0
NK_17
108.6
NK_18
108.4
NK_19
105.9
NK_20
105.7
NK_21
103.7
NK_22
102.1
NK_23
102.0
NK_24
101.4
NK_25
101.0
NK_26
100.2
NK_27
100.1
NK_28
100.1
NK_29
99.8
NK_30
99.7
NK_31
99.2
NK_32
98.4
NK_33
98.0
NK_34
97.6
NK_35
97.0
NK_36
96.8
NK_37
95.8
NK_38
95.5
NK_39
95.0
NK_40
94.8
NK_41
94.2
NK_42
94.0
NK_43
93.6
NK_44
93.4
NK_45
91.8
NK_46
91.7
NK_47
91.3
NK_48
91.0
NK_49
90.5
NK_50
90.4
NK_51
89.7
NK_52
89.6
NK_53
89.6
NK_54
89.5
NK_55
89.3
NK_56
88.7
NK_57
88.4
NK_58
88.0
NK_59
87.8
NK_60
87.8
NK_61
87.0
NK_62
86.9
NK_63
86.3
NK_64
86.1
NK_65
85.9
NK_66
85.5
NK_67
84.6
NK_68
84.3
NK_69
82.9
NK_70
82.6
NK_71
81.5
NK_72
80.0
NK_73
79.7
NK_74
79.1
NK_75
78.8
NK_76
78.5
NK_77
76.6
NK_78
76.5
NK_79
76.4
NK_80
73.6
NK_81
72.9
NK_82
72.5
NK_83
72.4
NK_84
71.5
NK_85
70.3
NK_86
70.2
NK_87
70.1
NK_88
70.0
NK_89
68.6
NK_90
64.0
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Human Protein Atlas project is funded
