A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1347.9
nTPM
Monaco:
264.9
nTPM
Schmiedel:
61.6
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
1347.9
HPA sample
nTPM
Classical monocyte nTPM: 1347.9
Samples: 6
Max nTPM: 2251.1
Min nTPM: 963.3
P10809_1003
2251.1
P10809_1020
963.3
P10809_1039
1287.7
P10809_1058
1112.6
P10809_1080
980.7
P10809_1107
1491.9
Intermediate monocyte nTPM: 976.8
Samples: 6
Max nTPM: 1617.1
Min nTPM: 503.8
P10809_1004
658.3
P10809_1023
1150.7
P10809_1042
1003.6
P10809_1061
503.8
P10809_1081
927.5
P10809_1108
1617.1
Non-classical monocyte nTPM: 914.1
Samples: 5
Max nTPM: 1321.2
Min nTPM: 580.6
P10809_1005
915.1
P10809_1053
900.7
P10809_1072
580.6
P10809_1082
853.0
P10809_1109
1321.2
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
264.9
Monaco sample
nTPM
Classical monocyte nTPM: 194.5
Samples: 4
Max nTPM: 259.7
Min nTPM: 137.4
RHH5313_R3680
259.7
RHH5221_R3593
169.6
RHH5250_R3622
137.4
RHH5279_R3651
211.1
Intermediate monocyte nTPM: 264.9
Samples: 4
Max nTPM: 301.9
Min nTPM: 177.6
RHH5314_R3681
281.0
RHH5222_R3594
299.1
RHH5251_R3623
301.9
RHH5280_R3652
177.6
Non-classical monocyte nTPM: 206.2
Samples: 4
Max nTPM: 256.3
Min nTPM: 147.5
RHH5315_R3682
256.3
RHH5223_R3595
182.5
RHH5252_R3624
238.3
RHH5281_R3653
147.5
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
61.6
Schmiedel sample id
TPM
Classical monocyte TPM: 61.6
Samples: 91
Max TPM: 81.0
Min TPM: 47.6
MONOCYTES_1
81.0
MONOCYTES_2
79.8
MONOCYTES_3
79.6
MONOCYTES_4
76.4
MONOCYTES_5
76.2
MONOCYTES_6
76.0
MONOCYTES_7
74.0
MONOCYTES_8
72.9
MONOCYTES_9
70.2
MONOCYTES_10
69.1
MONOCYTES_11
68.9
MONOCYTES_12
68.1
MONOCYTES_13
68.0
MONOCYTES_14
67.2
MONOCYTES_15
67.1
MONOCYTES_16
67.1
MONOCYTES_17
67.1
MONOCYTES_18
67.0
MONOCYTES_19
66.9
MONOCYTES_20
66.7
MONOCYTES_21
66.2
MONOCYTES_22
65.9
MONOCYTES_23
65.9
MONOCYTES_24
65.8
MONOCYTES_25
65.5
MONOCYTES_26
65.4
MONOCYTES_27
65.0
MONOCYTES_28
64.7
MONOCYTES_29
64.6
MONOCYTES_30
64.5
MONOCYTES_31
64.3
MONOCYTES_32
64.2
MONOCYTES_33
64.1
MONOCYTES_34
64.0
MONOCYTES_35
63.5
MONOCYTES_36
63.4
MONOCYTES_37
63.2
MONOCYTES_38
62.7
MONOCYTES_39
62.3
MONOCYTES_40
62.1
MONOCYTES_41
62.1
MONOCYTES_42
62.1
MONOCYTES_43
62.0
MONOCYTES_44
61.4
MONOCYTES_45
61.1
MONOCYTES_46
61.1
MONOCYTES_47
60.8
MONOCYTES_48
60.8
MONOCYTES_49
60.7
MONOCYTES_50
60.4
MONOCYTES_51
60.2
MONOCYTES_52
60.2
MONOCYTES_53
60.0
MONOCYTES_54
59.4
MONOCYTES_55
59.2
MONOCYTES_56
59.2
MONOCYTES_57
58.4
MONOCYTES_58
58.4
MONOCYTES_59
58.3
MONOCYTES_60
58.2
MONOCYTES_61
58.0
MONOCYTES_62
57.6
MONOCYTES_63
57.5
MONOCYTES_64
57.4
MONOCYTES_65
57.1
MONOCYTES_66
56.8
MONOCYTES_67
56.7
MONOCYTES_68
56.5
MONOCYTES_69
56.1
MONOCYTES_70
55.7
MONOCYTES_71
55.4
MONOCYTES_72
55.3
MONOCYTES_73
55.3
MONOCYTES_74
55.2
MONOCYTES_75
55.1
MONOCYTES_76
54.8
MONOCYTES_77
54.7
MONOCYTES_78
54.3
MONOCYTES_79
54.2
MONOCYTES_80
53.8
MONOCYTES_81
53.3
MONOCYTES_82
53.0
MONOCYTES_83
52.8
MONOCYTES_84
52.8
MONOCYTES_85
52.5
MONOCYTES_86
51.6
MONOCYTES_87
51.3
MONOCYTES_88
50.4
MONOCYTES_89
50.4
MONOCYTES_90
48.2
MONOCYTES_91
47.6
Show allShow less
Non-classical monocyte TPM: 55.0
Samples: 90
Max TPM: 71.6
Min TPM: 42.3
M2_1
71.6
M2_2
71.3
M2_3
70.8
M2_4
68.6
M2_5
67.5
M2_6
67.1
M2_7
66.3
M2_8
65.9
M2_9
65.6
M2_10
64.9
M2_11
63.7
M2_12
62.7
M2_13
62.3
M2_14
61.0
M2_15
60.9
M2_16
60.8
M2_17
60.7
M2_18
60.3
M2_19
59.6
M2_20
59.4
M2_21
59.2
M2_22
59.0
M2_23
58.2
M2_24
58.1
M2_25
58.0
M2_26
58.0
M2_27
58.0
M2_28
57.7
M2_29
57.5
M2_30
57.5
M2_31
57.5
M2_32
56.7
M2_33
56.7
M2_34
56.4
M2_35
56.4
M2_36
55.7
M2_37
55.4
M2_38
55.2
M2_39
55.0
M2_40
54.9
M2_41
54.8
M2_42
54.8
M2_43
54.8
M2_44
54.6
M2_45
54.5
M2_46
54.3
M2_47
54.2
M2_48
54.2
M2_49
53.9
M2_50
53.7
M2_51
53.5
M2_52
53.2
M2_53
53.1
M2_54
53.0
M2_55
52.8
M2_56
52.8
M2_57
52.4
M2_58
52.4
M2_59
52.0
M2_60
51.9
M2_61
51.9
M2_62
51.7
M2_63
51.4
M2_64
51.1
M2_65
51.1
M2_66
51.1
M2_67
51.0
M2_68
50.4
M2_69
50.0
M2_70
49.9
M2_71
49.8
M2_72
49.7
M2_73
49.6
M2_74
49.5
M2_75
49.5
M2_76
49.1
M2_77
48.2
M2_78
47.6
M2_79
47.2
M2_80
47.2
M2_81
46.5
M2_82
46.3
M2_83
46.0
M2_84
45.7
M2_85
45.3
M2_86
45.1
M2_87
44.9
M2_88
44.9
M2_89
44.5
M2_90
42.3
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Human Protein Atlas project is funded
