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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • RPS6
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:472.5 nTPM
GTEx:1067.2 nTPM
FANTOM5:239.2 Scaled Tags Per Million
Macaque:440.7 nTPM
Pig:61.3 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

472.5
Sample id Sample description nTPM
Putamen
nTPM: 472.5
2647 Male, age 75, left hemisphere 515.1
1829 Male, age 74, unknown 496.2
1937 Female, age 91, right hemisphere 478.0
2489 Female, age 72, unknown 470.1
2466 Female, age 79, unknown 458.2
2482 Female, age 94, left hemisphere 452.9
1838 Male, age 80, right hemisphere 436.6

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1067.2
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 1067.2
Samples: 254

Max nTPM: 2748.1
Min nTPM: 431.7
Std nTPM: 354.0
Median nTPM: 984.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 2748.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 2722.4
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 2428.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 2315.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 2171.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1917.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1909.2
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 1905.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1883.2
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 1854.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1818.1
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 1794.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1777.7
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 1765.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1731.5
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 1729.0
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 1683.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1652.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1644.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 1626.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1623.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1566.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1556.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1541.4
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 1531.2
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 1505.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1474.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1474.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1472.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1470.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1455.1
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 1452.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1437.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1431.3
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 1428.4
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 1417.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1416.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1411.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1397.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1386.4
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 1382.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1372.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1354.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 1348.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1346.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1322.4
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 1301.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1293.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1269.6
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 1244.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1239.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1236.1
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 1232.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1231.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1227.8
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 1227.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1217.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1216.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 1213.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 1207.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1206.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1196.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1193.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1181.0
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 1180.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 1179.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1173.4
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 1171.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 1171.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1170.5
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 1170.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1168.8
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 1159.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 1157.6
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 1146.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1143.3
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 1142.2
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 1137.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 1137.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 1134.3
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 1131.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 1129.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1125.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1120.9
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 1117.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 1113.0
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 1109.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 1107.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 1104.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1104.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 1102.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 1102.5
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 1101.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 1100.8
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 1095.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1094.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 1093.7
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 1088.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 1082.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1076.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 1075.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 1073.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 1070.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1046.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1044.6
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 1044.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 1039.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 1037.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 1036.6
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 1032.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 1030.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 1026.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 1023.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1017.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 1014.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 1005.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1005.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 998.6
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 998.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 992.9
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 990.0
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 989.3
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 987.9
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 987.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 987.0
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 985.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 984.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 983.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 980.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 978.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 978.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 975.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 973.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 972.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 968.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 966.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 966.5
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 960.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 954.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 951.5
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 947.1
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 946.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 945.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 945.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 942.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 941.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 941.2
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 941.2
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 931.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 929.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 929.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 926.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 925.8
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 925.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 923.8
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 920.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 919.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 917.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 917.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 917.2
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 916.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 911.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 910.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 906.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 905.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 900.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 897.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 894.1
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 888.8
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 876.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 874.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 868.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 863.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 862.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 862.3
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 862.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 858.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 858.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 857.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 855.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 855.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 849.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 845.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 842.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 840.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 838.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 837.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 835.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 834.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 834.5
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 830.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 827.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 824.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 823.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 822.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 821.5
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 817.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 816.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 814.5
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 813.8
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 812.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 811.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 808.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 802.4
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 799.4
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 796.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 795.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 784.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 780.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 779.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 775.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 773.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 767.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 767.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 766.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 765.7
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 764.1
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 763.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 762.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 759.1
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 756.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 751.1
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 743.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 742.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 742.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 731.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 727.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 715.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 711.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 708.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 705.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 704.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 704.8
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 704.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 703.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 696.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 696.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 693.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 688.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 680.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 678.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 677.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 667.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 665.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 662.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 650.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 638.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 638.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 612.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 606.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 603.4
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 591.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 545.1
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 431.7
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

239.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 239.2
FF:10176-103C5 60 years, female 239.2

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

440.7
Macaque sample Sample description nTPM
Putamen
nTPM: 440.7
Samples: 2

Max nTPM: 496.0
Min nTPM: 385.4
Sample A 385.4
Sample B 496.0

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.3
Pig sample Sample description nTPM
Putamen
nTPM: 61.3
Samples: 3

Max nTPM: 72.7
Min nTPM: 50.8
Sample B Female 50.8
Sample C Male 72.7
Sample D Male 60.4

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