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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
311.0
nTPM
FANTOM5:
159.0
Scaled Tags Per Million
Pig:
151.0
nTPM
Allen mouse:
4.2
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
311.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 111.5
2301
Female, age 85, both hemispheres
150.3
2188
Female, age 91, both hemispheres
107.8
2090
Male, age 80, both hemispheres
104.8
1984
Male, age 76, both hemispheres
82.9
Dorsal cochlear nucleus nTPM: 122.4
2187
Female, age 91, both hemispheres
158.7
2058
Male, age 76, both hemispheres
140.2
2370
Male, age 61, both hemispheres
123.7
2802
Male, age 74, right hemisphere
98.4
2378
Male, age 80, both hemispheres
90.9
Dorsal tegmental nucleus nTPM: 135.3
1936
Male, age 76, left hemisphere
147.0
2083
Male, age 80, both hemispheres
140.7
2358
Male, age 61, both hemispheres
138.5
2326
Male, age 74, both hemispheres
114.8
Dorsolateral tegmental area nTPM: 153.7
2141
Male, age 76, both hemispheres
293.7
2360
Male, age 74, both hemispheres
154.0
2654
Male, age 80, both hemispheres
130.4
2751
Female, age 85, both hemispheres
108.2
2337
Male, age 61, both hemispheres
82.1
Kolliker-Fuse nucleus nTPM: 144.8
2315
Male, age 76, right hemisphere
247.7
2163
Male, age 80, both hemispheres
106.0
2793
Female, age 91, left hemisphere
80.7
Lateral lemniscal nuclei nTPM: 95.3
2036
Male, age 80, both hemispheres
139.6
2746
Female, age 85, left hemisphere
109.1
2169
Male, age 76, both hemispheres
90.3
2453
Male, age 74, right hemisphere
80.4
2320
Female, age 91, left hemisphere
56.9
Lateral parabrachial nucleus nTPM: 160.3
2790
Male, age 61, both hemispheres
176.9
2139
Female, age 85, right hemisphere
170.1
2792
Male, age 76, both hemispheres
166.6
2013
Male, age 80, both hemispheres
127.5
Lateral vestibular nucleus nTPM: 113.4
2311
Male, age 80, both hemispheres
132.5
2184
Male, age 76, both hemispheres
94.2
Locus coeruleus nTPM: 311.0
2123
Female, age 91, both hemispheres
362.6
2014
Male, age 55, unknown
337.9
2788
Male, age 74, unknown
312.3
1980
Male, age 76, both hemispheres
310.6
2720
Male, age 74, both hemispheres
306.6
2317
Female, age 72, unknown
296.3
2162
Male, age 80, both hemispheres
250.5
Medial parabrachial nucleus nTPM: 146.6
2786
Male, age 76, both hemispheres
181.7
2170
Female, age 91, both hemispheres
160.9
2854
Male, age 80, both hemispheres
153.6
2156
Male, age 61, both hemispheres
150.6
2463
Female, age 85, right hemisphere
86.2
Medial periolivary nuclei nTPM: 96.6
2791
Male, age 74, right hemisphere
169.4
2063
Male, age 76, both hemispheres
115.0
2081
Male, age 80, both hemispheres
72.3
2171
Female, age 85, both hemispheres
69.1
2458
Female, age 91, both hemispheres
57.3
Motor facial nucleus nTPM: 126.4
2365
Male, age 74, right hemisphere
147.2
2327
Male, age 80, both hemispheres
143.0
2126
Male, age 61, both hemispheres
138.9
2697
Female, age 85, both hemispheres
135.7
2062
Male, age 76, both hemispheres
115.5
2795
Female, age 91, both hemispheres
77.9
Motor trigeminal nucleus nTPM: 124.7
2335
Male, age 61, both hemispheres
168.2
2309
Male, age 76, both hemispheres
141.8
2079
Male, age 80, both hemispheres
109.1
2560
Male, age 74, both hemispheres
103.7
2321
Female, age 91, both hemispheres
100.7
Nuclei of the trapezoid body nTPM: 97.8
2735
Female, age 85, both hemispheres
135.7
1983
Male, age 76, both hemispheres
103.4
2166
Male, age 80, both hemispheres
101.8
2159
Male, age 61, both hemispheres
83.0
2368
Female, age 91, both hemispheres
65.4
Nucleus raphe magnus nTPM: 104.8
2455
Male, age 74, both hemispheres
154.0
2160
Male, age 61, both hemispheres
130.0
2172
Female, age 85, both hemispheres
127.2
2328
Male, age 80, both hemispheres
112.9
2051
Male, age 76, both hemispheres
57.9
2459
Female, age 91, both hemispheres
46.8
Paramedian reticular nucleus nTPM: 163.1
2313
Male, age 61, both hemispheres
234.7
2057
Male, age 80, both hemispheres
144.7
2050
Female, age 85, both hemispheres
144.1
2052
Male, age 76, both hemispheres
128.9
Pedunculopontine tegmental nucleus nTPM: 177.0
1921
Female, age 85, both hemispheres
222.7
2334
Male, age 80, both hemispheres
195.8
2338
Male, age 61, both hemispheres
112.5
Pontine nuclei nTPM: 79.4
2787
Female, age 85, both hemispheres
125.6
1863
Male, age 55, unknown
90.3
2727
Male, age 61, right hemisphere
76.8
2109
Female, age 72, unknown
76.1
2115
Male, age 80, left hemisphere
74.8
2319
Female, age 91, both hemispheres
71.9
2454
Male, age 74, left hemisphere
61.4
1968
Male, age 76, left hemisphere
58.3
Pontine raphe nucleus nTPM: 217.3
2853
Male, age 76, midline
274.0
2122
Female, age 85, midline
160.6
Posteroventral cochlear nucleus nTPM: 111.6
2752
Female, age 85, both hemispheres
175.2
2070
Male, age 76, both hemispheres
115.5
2135
Female, age 91, both hemispheres
103.4
2371
Male, age 61, both hemispheres
98.0
2341
Male, age 80, both hemispheres
66.0
Principal sensory trigeminal nucleus nTPM: 103.2
2158
Male, age 61, both hemispheres
136.7
2008
Male, age 80, left hemisphere
120.0
2324
Male, age 76, both hemispheres
101.6
2367
Female, age 91, left hemisphere
54.6
Reticular pontine nucleus, caudal nTPM: 93.2
2092
Male, age 76, both hemispheres
113.1
2559
Male, age 74, both hemispheres
104.3
2332
Male, age 80, right hemisphere
101.0
2457
Female, age 91, both hemispheres
54.4
Reticular pontine nucleus, oral nTPM: 112.6
2012
Female, age 85, both hemispheres
146.1
2167
Male, age 76, both hemispheres
135.3
1939
Male, age 80, both hemispheres
120.2
2361
Male, age 74, both hemispheres
88.3
2366
Female, age 91, both hemispheres
73.2
Reticulotegmental nucleus nTPM: 127.2
2325
Male, age 76, both hemispheres
182.6
2322
Female, age 91, both hemispheres
113.9
2333
Male, age 80, both hemispheres
108.4
2452
Male, age 74, both hemispheres
103.9
Spinal trigeminal nucleus, oral nTPM: 127.6
1978
Male, age 76, both hemispheres
168.6
2737
Female, age 85, both hemispheres
127.4
2164
Male, age 80, both hemispheres
86.8
Subcoeruleus area nTPM: 162.5
2323
Female, age 91, left hemisphere
276.7
2451
Male, age 74, both hemispheres
162.3
1958
Male, age 80, both hemispheres
158.4
2089
Male, age 76, left hemisphere
129.4
2369
Female, age 85, left hemisphere
85.6
Superior olive nTPM: 127.8
1875
Female, age 85, both hemispheres
162.9
2364
Male, age 74, right hemisphere
156.4
2020
Male, age 76, both hemispheres
135.0
2329
Male, age 80, right hemisphere
113.5
2561
Female, age 91, both hemispheres
71.3
Ventral periolivary nuclei nTPM: 125.9
2130
Female, age 85, both hemispheres
150.4
2023
Male, age 76, both hemispheres
150.3
2165
Male, age 80, both hemispheres
122.3
2794
Female, age 91, left hemisphere
80.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 115.3
2359
Male, age 61, both hemispheres
173.8
1959
Male, age 76, both hemispheres
132.0
2449
Male, age 74, both hemispheres
123.7
2840
Female, age 85, both hemispheres
104.5
2161
Male, age 80, both hemispheres
103.7
2456
Female, age 91, both hemispheres
53.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
151.0
Pig sample
Sample description
nTPM
Pons nTPM: 151.0
Samples: 4
Max nTPM: 172.3
Min nTPM: 88.1
Sample A
Female
172.3
Sample B
Female
171.7
Sample C
Male
172.0
Sample D
Male
88.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.