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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:253.5 nTPM
HPA Brain:328.2 nTPM
GTEx:253.5 nTPM
Pig:227.3 nTPM
Mouse:466.2 nTPM
Allen mouse:22.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

328.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 251.2
2226 Male, age 75, left hemisphere 268.9
1961 Female, age 42, unknown 233.6
Dorsomedial nucleus
nTPM: 244.5
2041 Female, age 72, unknown 275.5
1989 Male, age 62, unknown 245.5
2017 Female, age 42, unknown 212.4
Lateral hypothalamic area
nTPM: 233.8
1791 Male, age 80, right hemisphere 316.1
2271 Male, age 75, both hemispheres 225.9
2412 Male, age 62, unknown 198.8
2228 Male, age 66, unknown 194.4
Mammillary body
nTPM: 261.1
1923 Female, age 72, unknown 314.8
1834 Female, age 42, unknown 261.8
2413 Male, age 66, unknown 251.0
1945 Male, age 80, right hemisphere 248.7
1948 Female, age 72, unknown 229.2
Paraventricular nucleus
nTPM: 225.5
2700 Male, age 62, unknown 225.5
Preoptic area
nTPM: 229.0
1861 Female, age 42, unknown 241.1
1907 Male, age 80, right hemisphere 239.4
2414 Female, age 72, unknown 206.5
Supraoptic nucleus
nTPM: 328.2
2043 Male, age 62, unknown 370.2
1894 Female, age 72, unknown 366.1
2835 Female, age 72, unknown 248.2
Ventromedial nucleus
nTPM: 232.5
1822 Female, age 42, unknown 237.1
1982 Female, age 72, unknown 227.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

253.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 253.5
Samples: 257

Max nTPM: 451.0
Min nTPM: 103.6
Std nTPM: 50.6
Median nTPM: 252.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 451.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 446.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 368.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 367.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 367.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 367.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 363.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 362.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 355.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 342.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 339.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 338.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 333.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 332.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 332.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 329.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 328.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 327.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 325.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 320.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 320.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 319.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 318.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 317.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 315.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 310.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 309.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 309.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 309.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 308.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 307.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 307.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 303.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 303.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 303.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 301.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 301.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 299.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 298.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 297.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 297.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 297.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 297.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 296.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 296.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 296.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 295.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 294.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 294.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 293.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 293.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 292.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 292.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 291.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 291.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 291.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 290.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 289.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 289.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 288.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 288.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 287.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 287.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 287.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 285.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 285.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 285.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 285.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 284.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 284.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 283.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 283.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 282.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 281.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 280.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 280.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 280.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 279.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 279.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 278.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 278.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 278.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 278.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 278.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 277.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 277.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 276.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 276.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 276.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 275.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 275.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 274.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 274.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 274.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 273.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 273.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 272.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 271.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 270.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 269.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 268.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 267.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 267.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 267.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 266.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 266.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 265.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 264.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 264.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 263.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 263.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 260.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 260.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 259.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 259.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 258.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 258.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 257.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 257.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 256.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 256.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 254.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 254.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 253.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 253.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 253.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 253.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 253.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 252.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 251.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 250.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 250.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 250.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 247.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 247.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 246.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 246.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 245.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 244.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 244.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 243.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 243.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 243.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 243.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 243.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 243.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 241.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 240.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 240.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 240.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 239.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 239.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 239.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 238.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 238.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 237.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 237.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 236.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 235.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 234.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 234.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 234.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 234.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 233.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 233.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 232.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 232.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 232.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 232.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 231.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 231.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 229.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 229.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 227.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 227.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 226.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 226.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 226.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 226.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 225.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 225.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 225.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 224.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 224.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 224.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 223.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 223.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 222.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 221.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 221.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 220.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 220.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 220.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 219.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 218.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 218.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 217.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 217.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 215.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 215.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 214.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 214.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 214.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 214.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 211.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 210.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 210.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 210.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 210.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 210.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 208.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 208.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 208.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 207.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 206.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 204.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 203.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 201.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 200.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 199.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 199.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 197.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 197.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 196.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 196.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 195.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 194.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 194.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 194.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 192.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 190.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 190.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 190.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 189.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 188.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 187.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 185.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 185.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 184.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 182.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 181.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 178.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 178.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 176.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 175.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 174.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 170.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 168.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 166.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 162.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 158.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 157.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 155.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 143.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 142.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 140.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 103.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

227.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 227.3
Samples: 4

Max nTPM: 264.7
Min nTPM: 194.0
Sample A Female 264.7
Sample B Female 242.0
Sample C Male 208.6
Sample D Male 194.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

466.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 466.3
Samples: 4

Max nTPM: 517.2
Min nTPM: 445.4
Sample A Male 445.4
Sample B Male 517.2
Sample C Female 450.7
Sample D Female 451.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

22.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 22.9
71489783 Antisense, RP_050512_04_E11, Mouse strain C57BL/6J (56 days, male) 22.9

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