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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
268.0
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 217.2
2586
Male, age 75, left hemisphere
275.8
2666
Male, age 74, left hemisphere
244.8
1827
Male, age 72, unknown
232.0
2828
Female, age 72, unknown
227.3
2411
Female, age 72, unknown
227.0
1870
Female, age 42, unknown
218.3
2019
Male, age 18, unknown
199.9
1833
Male, age 53, unknown
196.9
1830
Male, age 51, unknown
181.6
2219
Male, age 76, both hemispheres
168.2
Dorsal raphe nucleus nTPM: 268.0
2298
Female, age 72, unknown
323.0
2016
Female, age 72, unknown
272.9
2047
Male, age 72, unknown
269.3
1828
Male, age 53, unknown
265.6
2750
Male, age 76, both hemispheres
209.4
Inferior colliculus nTPM: 241.2
2097
Female, age 72, unknown
272.7
1890
Male, age 53, unknown
242.3
1848
Female, age 42, unknown
235.3
2849
Male, age 72, unknown
214.4
Median raphe nucleus nTPM: 232.8
2220
Male, age 76, midline
232.8
Periaquaductal grey, anterior nTPM: 240.4
1947
Male, age 18, unknown
255.8
1795
Male, age 51, unknown
247.6
2502
Female, age 75, unknown
217.8
Periaquaductal grey, dorsal nTPM: 259.5
2850
Male, age 76, both hemispheres
298.3
1840
Male, age 53, unknown
274.9
1831
Male, age 72, unknown
236.6
2464
Female, age 72, unknown
228.2
Periaquaductal grey, lateral nTPM: 245.6
2140
Male, age 76, both hemispheres
261.2
2053
Male, age 18, unknown
247.4
2272
Male, age 74, both hemispheres
228.2
Pretectal area nTPM: 237.0
1817
Female, age 42, unknown
271.6
2224
Female, age 72, unknown
265.2
2273
Male, age 74, both hemispheres
257.1
1816
Male, age 51, unknown
252.6
2667
Female, age 75, unknown
252.2
1815
Male, age 53, unknown
240.1
1944
Female, age 72, unknown
235.7
2007
Male, age 72, unknown
232.0
2825
Male, age 18, unknown
226.5
2316
Male, age 76, right hemisphere
190.7
2407
Male, age 75, both hemispheres
183.0
Red nucleus nTPM: 219.5
1821
Female, age 72, unknown
273.1
2725
Female, age 75, unknown
244.4
1954
Female, age 42, unknown
242.8
2503
Female, age 72, unknown
242.3
1904
Male, age 53, unknown
226.1
2227
Male, age 72, unknown
216.8
2769
Male, age 72, unknown
215.3
2823
Male, age 76, right hemisphere
215.3
1865
Male, age 51, unknown
212.4
2785
Male, age 18, unknown
195.2
2588
Male, age 74, left hemisphere
190.8
2584
Male, age 75, left hemisphere
159.7
Substantia nigra nTPM: 237.5
1916
Female, age 42, unknown
273.8
1851
Male, age 51, unknown
261.8
2699
Male, age 18, unknown
258.0
2241
Male, age 72, unknown
254.3
1889
Female, age 72, unknown
242.6
2583
Male, age 75, right hemisphere
230.0
1941
Male, age 53, unknown
220.6
2409
Female, age 72, unknown
216.5
2665
Male, age 74, both hemispheres
209.3
2590
Female, age 75, unknown
207.6
Superior colliculus nTPM: 222.3
2087
Female, age 72, unknown
241.4
1995
Male, age 72, unknown
236.8
1796
Male, age 53, unknown
235.2
2261
Male, age 18, unknown
235.2
2668
Female, age 75, unknown
230.9
2664
Male, age 75, both hemispheres
225.0
2587
Male, age 74, left hemisphere
217.2
1839
Male, age 51, unknown
208.5
1913
Female, age 42, unknown
205.2
1895
Male, age 76, right hemisphere
187.4
Ventral tegmental area nTPM: 240.1
2410
Female, age 72, unknown
263.6
1942
Male, age 51, unknown
251.8
1915
Female, age 42, unknown
241.6
2218
Male, age 76, both hemispheres
233.5
2021
Male, age 53, unknown
231.9
2223
Female, age 72, unknown
217.9
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
274.7
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 274.7
Samples: 183
Max nTPM: 579.2
Min nTPM: 108.6
Std nTPM: 86.9
Median nTPM: 264.2
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
579.2
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
559.6
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
553.9
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
526.3
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
523.4
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
468.8
GTEX-1192X-0011-R2b-SM-GI4VV
50-59 years, male
457.5
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
457.5
GTEX-1O9I2-0011-R2b-SM-F3K53
50-59 years, male
455.1
GTEX-1117F-0011-R2b-SM-GI4VL
60-69 years, female
431.6
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
418.4
GTEX-1KWVE-0011-R2a-SM-G8OLX
30-39 years, male
416.8
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
410.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
404.2
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
398.5
GTEX-1MCQQ-0011-R2a-SM-F649V
60-69 years, male
397.9
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
397.0
GTEX-1RQEC-0011-R2b-SM-EY5ZT
60-69 years, male
394.8
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
393.6
GTEX-1JMPZ-0011-R2a-SM-G8LLS
30-39 years, male
392.8
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
383.7
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
383.1
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
377.6
GTEX-15SHU-0011-R2a-SM-GPRXS
40-49 years, female
372.5
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
370.4
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
367.5
GTEX-13OW7-0011-R2b-SM-H6Q8E
50-59 years, male
365.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
359.5
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
357.6
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
357.2
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
349.7
GTEX-1LSVX-0011-R2a-SM-G8OL9
60-69 years, male
341.6
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
332.2
GTEX-1R9PO-0011-R2a-SM-F2TBH
60-69 years, female
330.2
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
329.7
GTEX-11TTK-0011-R2b-SM-GJ3PU
60-69 years, female
329.2
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
328.1
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
327.6
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
326.6
GTEX-1QMI2-0011-R2b-SM-F648R
60-69 years, male
324.4
GTEX-1N2EF-0011-R2b-SM-F6482
60-69 years, male
322.8
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
322.6
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
322.0
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
320.0
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
318.7
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
317.6
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
317.6
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
317.1
GTEX-1NV5F-0011-R2a-SM-G8LME
60-69 years, female
316.6
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
315.5
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
314.7
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
314.4
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
312.6
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
312.4
GTEX-1LG7Y-0011-R2b-SM-G8LMM
50-59 years, male
307.4
GTEX-11NUK-0011-R2a-SM-GINAO
50-59 years, male
307.1
GTEX-1JN1M-0011-R2b-SM-G9EPE
60-69 years, female
305.8
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
303.2
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
301.2
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
299.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
297.7
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
296.3
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
295.8
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
295.7
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
295.4
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
294.0
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
292.7
GTEX-1KD4Q-0011-R2a-SM-F649I
40-49 years, male
292.5
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
288.1
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
284.1
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
283.5
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
280.7
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
279.6
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
279.3
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
278.2
GTEX-1NV8Z-0011-R2b-SM-F648N
60-69 years, male
278.2
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
277.6
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
277.5
GTEX-1MJK2-0011-R2b-SM-EXUS5
50-59 years, male
277.5
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
277.1
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
275.8
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
275.3
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
273.5
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
272.5
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
272.5
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
270.8
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
270.4
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
269.6
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
269.5
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
266.9
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
266.2
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
264.2
GTEX-1PPGY-0011-R2b-SM-F33YW
60-69 years, male
263.6
GTEX-117XS-0011-R2b-SM-GI4VT
60-69 years, male
262.9
GTEX-1POEN-0011-R2b-SM-G8LLP
30-39 years, female
260.3
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
259.2
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
258.9
GTEX-12696-0011-R2b-SM-GHWPY
60-69 years, male
258.2
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
257.6
GTEX-13OVL-0011-R2b-SM-H65ZN
50-59 years, male
257.1
GTEX-1N2EE-0011-R2a-SM-F649F
60-69 years, male
254.3
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
248.0
GTEX-1PWST-0011-R2b-SM-F3K5I
70-79 years, male
246.0
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
245.4
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
245.2
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
244.4
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
242.7
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
242.7
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
242.6
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
242.2
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
241.6
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
240.2
GTEX-111FC-0011-R2a-SM-GIN8S
60-69 years, male
240.1
GTEX-1PIIG-0011-R2b-SM-F648W
30-39 years, male
240.0
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
239.8
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
239.4
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
239.0
GTEX-ZAK1-0011-R2a-SM-GPRX1
50-59 years, female
238.3
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
237.6
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
235.4
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
233.9
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
232.7
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
232.2
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
231.3
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
228.6
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
227.3
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
227.2
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
224.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
222.6
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
222.3
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
220.6
GTEX-1P4AB-0011-R2a-SM-F649K
50-59 years, male
220.3
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
219.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
219.2
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
216.0
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
215.2
GTEX-1JJ6O-0011-R2a-SM-EY5ZO
60-69 years, male
215.1
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
214.7
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
212.8
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
210.1
GTEX-1R9K4-0011-R2b-SM-G8LLF
60-69 years, male
209.7
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
209.2
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
208.2
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
206.9
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
206.3
GTEX-1JMQJ-0011-R2a-SM-F6493
50-59 years, male
203.9
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
203.7
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
203.4
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
202.5
GTEX-1IDJH-0011-R2a-SM-GPI9D
70-79 years, male
202.0
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
200.9
GTEX-ZYY3-0011-R2a-SM-GNTB2
60-69 years, female
200.9
GTEX-1LKK1-0011-R2b-SM-G8OLT
50-59 years, female
197.4
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
197.2
GTEX-ZZPT-0011-R2a-SM-GNTB1
50-59 years, male
195.9
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
192.2
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
192.1
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
191.7
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
191.6
GTEX-1RQED-0011-R2a-SM-F3K5T
60-69 years, male
190.3
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
189.0
GTEX-1RDX4-0011-R2b-SM-F649Z
50-59 years, female
187.4
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
185.3
GTEX-1I19N-0011-R2b-SM-GPRYG
70-79 years, male
181.9
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
177.3
GTEX-1HBPH-0011-R2a-SM-GQ1DS
40-49 years, female
176.0
GTEX-ZAJG-0011-R2a-SM-GNTAX
50-59 years, female
171.1
GTEX-16GPK-0011-R2a-SM-GRR1F
60-69 years, male
168.7
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
163.6
GTEX-1KD5A-0011-R2b-SM-G9EPP
50-59 years, male
162.7
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
162.3
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
161.7
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
161.4
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
157.1
GTEX-15G19-0011-R2b-SM-H6Q7S
60-69 years, male
154.3
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
153.0
GTEX-X4EP-0011-R2B-SM-3P625
60-69 years, female
150.3
GTEX-1CB4J-0011-R2a-SM-9WG5N
60-69 years, male
138.7
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
135.1
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
130.5
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
118.7
GTEX-RN5K-0011-R2A-SM-GQ1CA
50-59 years, female
116.0
GTEX-1N5O9-0011-R2a-SM-G8LM1
60-69 years, male
108.6
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
310.8
Pig sample
Sample description
nTPM
Substantia nigra nTPM: 263.7
Samples: 4
Max nTPM: 342.5
Min nTPM: 192.0
Sample A
Female
342.5
Sample B
Female
243.1
Sample C
Male
277.2
Sample D
Male
192.0
Midbrain nTPM: 287.5
Samples: 4
Max nTPM: 366.2
Min nTPM: 238.9
Sample A
Female
277.3
Sample B
Female
238.9
Sample C
Male
366.2
Sample D
Male
267.7
Periaqueductal gray nTPM: 229.3
Samples: 3
Max nTPM: 259.0
Min nTPM: 203.2
Sample B
Female
225.8
Sample C
Male
259.0
Sample D
Male
203.2
Superior colliculi nTPM: 310.8
Samples: 4
Max nTPM: 358.0
Min nTPM: 265.8
Sample A
Female
317.3
Sample B
Female
302.2
Sample C
Male
358.0
Sample D
Male
265.8
MIDBRAIN - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
482.3
Mouse sample
Sample description
nTPM
Midbrain nTPM: 482.3
Samples: 4
Max nTPM: 494.2
Min nTPM: 468.0
Sample A
Male
490.4
Sample B
Male
468.0
Sample C
Female
476.6
Sample D
Female
494.2
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.