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RPS11
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  • TISSUE

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  • RPS11
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:2038.7 nTPM
HPA Brain:1016.4 nTPM
GTEx:2038.7 nTPM
FANTOM5:246.2 Scaled Tags Per Million
Pig:445.7 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1016.4
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 773.9
1981 Female, age 72, midline 997.9
2565 Male, age 75, midline 864.1
2048 Male, age 55, midline 710.0
2194 Female, age 79, both hemispheres 688.0
2816 Male, age 47, midline 609.4
Cervical spinal cord, dorsal horn
nTPM: 805.2
2173 Female, age 72, unknown 1023.3
2069 Male, age 47, both hemispheres 1003.4
2296 Male, age 66, both hemispheres 861.9
1877 Male, age 55, unknown 785.6
2721 Male, age 90, both hemispheres 596.1
2297 Male, age 75, both hemispheres 560.6
Cervical spinal cord, ventral horn
nTPM: 1016.4
2098 Female, age 72, unknown 1294.3
2480 Male, age 75, both hemispheres 1286.2
2809 Male, age 90, both hemispheres 1245.2
2295 Male, age 66, both hemispheres 920.2
2068 Male, age 55, unknown 849.3
2820 Female, age 79, both hemispheres 503.2

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2038.7
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 2038.7
Samples: 204

Max nTPM: 4805.7
Min nTPM: 902.7
Std nTPM: 617.2
Median nTPM: 1943.6
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 4805.7
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 3966.1
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 3666.6
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 3638.1
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 3436.6
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 3372.0
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 3311.3
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 3284.1
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 3194.1
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 3175.6
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 3167.8
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 3167.4
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 3158.4
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 3124.6
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 3098.5
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 3077.4
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 2960.3
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 2900.7
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 2879.3
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 2861.1
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 2850.8
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 2819.4
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 2812.1
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 2803.7
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 2776.8
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 2759.0
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 2741.6
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 2733.6
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 2732.4
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 2698.5
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 2698.1
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 2695.3
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 2671.4
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 2640.8
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 2640.4
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 2614.5
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 2600.4
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 2589.1
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 2566.5
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 2543.0
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 2496.4
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 2479.0
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 2478.6
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 2443.8
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 2415.1
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 2412.1
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 2403.6
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 2393.1
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 2387.2
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 2382.8
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 2374.8
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 2367.8
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 2346.5
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 2325.5
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 2319.2
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 2315.0
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 2312.2
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 2311.5
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 2305.2
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 2286.4
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 2276.2
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 2271.7
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 2265.7
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 2264.4
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 2250.1
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 2243.2
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 2223.0
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 2192.5
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 2191.6
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 2187.3
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 2162.8
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 2154.7
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 2151.1
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 2147.9
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 2140.5
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 2132.7
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 2131.1
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 2128.2
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 2128.0
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 2123.5
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 2118.1
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 2116.7
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 2101.6
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 2094.0
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 2090.1
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 2088.8
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 2083.3
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 2077.7
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 2069.9
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 2062.2
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 2057.5
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 2043.4
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 2035.4
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 2031.3
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 2029.3
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 2025.3
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 2013.4
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 2010.0
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 2004.5
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 2003.3
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 1971.4
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 1947.1
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 1940.1
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 1915.9
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 1913.9
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 1912.0
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 1911.6
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 1910.0
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 1907.3
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 1892.1
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 1888.1
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 1886.8
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 1881.8
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 1871.4
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 1868.9
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 1865.6
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 1864.4
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 1852.8
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 1839.3
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 1836.3
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 1829.7
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 1829.2
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 1819.9
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 1799.4
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 1788.0
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 1776.4
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 1774.6
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 1769.2
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 1764.9
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 1753.3
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 1743.0
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 1742.6
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1740.0
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 1732.0
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 1723.8
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 1721.0
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 1707.3
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 1682.6
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 1679.0
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 1674.0
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 1660.7
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 1660.7
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 1633.0
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 1628.4
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 1621.2
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 1613.1
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 1611.0
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 1610.6
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 1610.0
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 1607.6
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 1585.9
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 1585.2
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 1577.4
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 1572.8
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 1563.3
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 1562.4
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 1560.1
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 1558.2
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 1555.4
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 1545.3
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 1542.4
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 1525.1
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 1520.1
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 1516.0
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 1514.0
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 1507.9
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 1486.0
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 1484.0
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 1480.6
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 1476.0
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 1466.6
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 1458.3
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 1449.2
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 1449.1
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 1434.8
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 1413.8
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 1401.3
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 1400.8
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 1400.0
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 1389.9
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 1385.8
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 1374.5
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 1356.6
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 1339.9
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 1336.5
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 1323.4
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 1323.3
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 1322.3
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 1305.6
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 1276.5
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 1265.9
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 1250.9
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 1245.6
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 1205.4
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 1199.1
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 1181.2
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 1145.8
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 1111.5
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 1089.7
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 1059.0
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 1040.5
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 1039.4
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 933.0
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 902.7
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

246.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 246.2
FF:10181-103D1 60 years, female 311.1
FF:10159-103A6 76 years, female 181.3

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

445.7
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 445.7
Samples: 4

Max nTPM: 724.0
Min nTPM: 278.3
Sample A Female 278.3
Sample B Female 453.8
Sample C Male 724.0
Sample D Male 326.7
Ventral spinal cord
nTPM: 374.0
Samples: 4

Max nTPM: 479.5
Min nTPM: 293.1
Sample A Female 293.1
Sample B Female 375.8
Sample C Male 479.5
Sample D Male 347.5

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