A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
2123.7
nTPM
Monaco:
344.1
nTPM
Schmiedel:
2628.0
TPM
NK-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
2123.7
HPA sample
nTPM
NK-cell nTPM: 2123.7
Samples: 6
Max nTPM: 2506.1
Min nTPM: 1516.8
P10809_1013
1721.3
P10809_1033
2488.0
P10809_1052
2223.9
P10809_1071
2506.1
P10809_1093
1516.8
P10809_1103
2286.3
NK-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
344.1
Monaco sample
nTPM
NK-cell nTPM: 344.1
Samples: 4
Max nTPM: 387.6
Min nTPM: 302.6
RHH5316_R3683
387.6
RHH5224_R3596
302.6
RHH5253_R3625
328.9
RHH5282_R3654
357.4
NK-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
2628.0
Schmiedel sample id
TPM
NK-cell TPM: 2628.0
Samples: 90
Max TPM: 3928.6
Min TPM: 1500.5
NK_1
3928.6
NK_2
3554.8
NK_3
3455.1
NK_4
3425.1
NK_5
3369.2
NK_6
3294.4
NK_7
3211.5
NK_8
3122.1
NK_9
3054.1
NK_10
3047.2
NK_11
3015.0
NK_12
2994.1
NK_13
2993.5
NK_14
2993.3
NK_15
2962.5
NK_16
2928.9
NK_17
2925.9
NK_18
2890.4
NK_19
2887.8
NK_20
2871.3
NK_21
2871.0
NK_22
2866.2
NK_23
2859.1
NK_24
2844.4
NK_25
2841.4
NK_26
2833.3
NK_27
2830.9
NK_28
2825.1
NK_29
2817.7
NK_30
2808.5
NK_31
2795.0
NK_32
2781.9
NK_33
2772.0
NK_34
2758.0
NK_35
2752.0
NK_36
2741.5
NK_37
2738.4
NK_38
2735.9
NK_39
2708.1
NK_40
2703.3
NK_41
2699.8
NK_42
2695.4
NK_43
2689.3
NK_44
2684.0
NK_45
2678.7
NK_46
2673.3
NK_47
2659.6
NK_48
2656.5
NK_49
2647.5
NK_50
2635.4
NK_51
2622.6
NK_52
2609.5
NK_53
2596.8
NK_54
2596.2
NK_55
2575.3
NK_56
2574.4
NK_57
2543.1
NK_58
2527.0
NK_59
2525.9
NK_60
2521.7
NK_61
2513.4
NK_62
2498.1
NK_63
2494.1
NK_64
2480.4
NK_65
2472.4
NK_66
2472.0
NK_67
2435.6
NK_68
2432.6
NK_69
2428.0
NK_70
2419.4
NK_71
2399.3
NK_72
2350.8
NK_73
2304.5
NK_74
2300.2
NK_75
2206.6
NK_76
2204.6
NK_77
2185.1
NK_78
2158.0
NK_79
2067.1
NK_80
2052.6
NK_81
1981.2
NK_82
1970.3
NK_83
1954.2
NK_84
1946.6
NK_85
1944.0
NK_86
1918.6
NK_87
1902.8
NK_88
1765.2
NK_89
1544.3
NK_90
1500.5
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.