A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1570.5
nTPM
Monaco:
108.5
nTPM
Schmiedel:
1494.7
TPM
NK-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
1570.5
HPA sample
nTPM
NK-cell nTPM: 1570.5
Samples: 6
Max nTPM: 1886.5
Min nTPM: 913.8
P10809_1013
1596.8
P10809_1033
1843.7
P10809_1052
1448.0
P10809_1071
1886.5
P10809_1093
913.8
P10809_1103
1734.4
NK-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
108.5
Monaco sample
nTPM
NK-cell nTPM: 108.6
Samples: 4
Max nTPM: 144.6
Min nTPM: 70.0
RHH5316_R3683
144.6
RHH5224_R3596
70.0
RHH5253_R3625
124.7
RHH5282_R3654
94.9
NK-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
1494.7
Schmiedel sample id
TPM
NK-cell TPM: 1494.7
Samples: 90
Max TPM: 2291.1
Min TPM: 1073.7
NK_1
2291.1
NK_2
1994.7
NK_3
1966.5
NK_4
1900.1
NK_5
1890.3
NK_6
1814.4
NK_7
1784.3
NK_8
1778.2
NK_9
1777.4
NK_10
1771.3
NK_11
1770.3
NK_12
1756.6
NK_13
1725.0
NK_14
1714.7
NK_15
1705.2
NK_16
1689.6
NK_17
1670.5
NK_18
1664.3
NK_19
1660.8
NK_20
1653.1
NK_21
1642.3
NK_22
1627.0
NK_23
1617.4
NK_24
1610.7
NK_25
1607.2
NK_26
1598.2
NK_27
1595.8
NK_28
1592.8
NK_29
1577.2
NK_30
1563.6
NK_31
1562.0
NK_32
1557.6
NK_33
1545.6
NK_34
1536.6
NK_35
1536.5
NK_36
1524.2
NK_37
1512.8
NK_38
1509.4
NK_39
1500.6
NK_40
1500.0
NK_41
1496.3
NK_42
1486.9
NK_43
1484.3
NK_44
1481.8
NK_45
1469.6
NK_46
1468.6
NK_47
1467.0
NK_48
1466.6
NK_49
1446.2
NK_50
1442.6
NK_51
1440.1
NK_52
1432.0
NK_53
1427.6
NK_54
1424.8
NK_55
1422.2
NK_56
1420.5
NK_57
1408.9
NK_58
1404.8
NK_59
1397.2
NK_60
1391.0
NK_61
1388.8
NK_62
1387.2
NK_63
1373.6
NK_64
1368.9
NK_65
1359.0
NK_66
1356.6
NK_67
1335.8
NK_68
1327.4
NK_69
1325.4
NK_70
1317.4
NK_71
1317.3
NK_72
1313.1
NK_73
1305.9
NK_74
1303.5
NK_75
1297.7
NK_76
1287.6
NK_77
1283.9
NK_78
1280.2
NK_79
1254.2
NK_80
1253.9
NK_81
1244.5
NK_82
1244.4
NK_83
1224.3
NK_84
1220.9
NK_85
1215.6
NK_86
1189.4
NK_87
1179.0
NK_88
1175.7
NK_89
1147.2
NK_90
1073.7
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.