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  • TISSUE

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  • RETREG2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:58.2 nTPM
HPA Brain:62.1 nTPM
GTEx:58.2 nTPM
Pig:79.7 nTPM
Mouse:170.0 nTPM
Allen mouse:14.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

62.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 55.6
2226 Male, age 75, left hemisphere 59.7
1961 Female, age 42, unknown 51.5
Dorsomedial nucleus
nTPM: 55.1
1989 Male, age 62, unknown 62.2
2041 Female, age 72, unknown 53.1
2017 Female, age 42, unknown 50.0
Lateral hypothalamic area
nTPM: 60.7
1791 Male, age 80, right hemisphere 72.8
2271 Male, age 75, both hemispheres 61.9
2228 Male, age 66, unknown 57.3
2412 Male, age 62, unknown 50.8
Mammillary body
nTPM: 62.1
1923 Female, age 72, unknown 84.3
2413 Male, age 66, unknown 59.2
1948 Female, age 72, unknown 58.4
1834 Female, age 42, unknown 54.3
1945 Male, age 80, right hemisphere 54.2
Paraventricular nucleus
nTPM: 39.8
2700 Male, age 62, unknown 39.8
Preoptic area
nTPM: 54.3
1907 Male, age 80, right hemisphere 61.1
1861 Female, age 42, unknown 55.4
2414 Female, age 72, unknown 46.3
Supraoptic nucleus
nTPM: 47.4
1894 Female, age 72, unknown 51.2
2835 Female, age 72, unknown 45.7
2043 Male, age 62, unknown 45.1
Ventromedial nucleus
nTPM: 55.7
1982 Female, age 72, unknown 61.9
1822 Female, age 42, unknown 49.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 58.2
Samples: 257

Max nTPM: 109.9
Min nTPM: 36.4
Std nTPM: 11.2
Median nTPM: 57.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 109.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 102.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 86.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 84.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 80.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 79.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 78.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 77.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 77.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 76.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 75.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 75.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 75.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 75.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 75.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 74.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 74.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 74.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 74.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 74.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 74.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 73.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 73.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 73.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 73.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 72.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 72.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 72.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 72.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 71.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 71.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 70.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 70.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 70.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 70.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 70.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 70.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 70.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 70.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 69.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 69.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 69.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 69.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 69.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 69.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 69.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 68.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 68.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 68.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 68.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 67.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 67.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 67.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 67.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 67.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 66.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 66.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 66.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 66.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 66.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 65.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 65.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 65.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 65.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 65.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 65.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 65.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 65.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 65.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 65.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 64.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 64.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 64.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 64.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 64.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 64.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 63.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 63.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 63.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 63.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 63.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 63.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 63.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 62.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 62.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 62.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 62.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 62.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 62.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 61.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 61.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 61.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 61.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 61.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 61.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 61.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 60.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 60.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 60.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 60.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 60.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 60.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 60.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 60.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 60.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 60.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 59.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 59.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 59.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 59.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 59.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 59.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 59.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 59.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 59.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 59.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 59.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 58.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 58.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 58.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 58.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 58.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 58.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 58.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 58.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 58.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 58.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 57.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 57.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 57.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 57.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 57.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 56.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 56.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 56.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 56.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 56.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 56.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 56.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 56.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 56.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 56.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 56.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 55.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 55.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 55.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 55.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 55.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 55.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 55.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 54.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 54.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 54.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 54.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 54.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 54.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 54.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 54.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 53.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 53.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 53.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 53.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 53.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 53.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 53.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 53.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 53.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 53.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 53.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 53.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 52.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 52.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 52.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 52.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 52.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 52.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 52.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 52.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 52.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 52.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 51.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 51.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 51.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 51.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 50.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 50.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 50.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 50.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 50.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 50.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 50.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 50.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 50.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 50.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 50.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 50.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 49.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 49.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 49.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 49.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 49.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 49.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 49.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 49.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 48.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 48.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 47.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 47.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 47.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 47.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 47.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 47.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 47.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 47.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 47.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 47.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 46.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 46.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 46.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 46.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 46.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 46.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 45.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 45.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 45.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 45.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 44.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 44.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 43.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 43.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 43.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 43.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 43.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 43.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 42.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 42.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 42.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 42.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 42.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 41.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 41.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 41.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 41.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 41.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 41.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 41.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 40.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 40.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 40.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 40.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 39.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 39.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 39.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 37.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 37.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 37.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 36.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

79.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 79.7
Samples: 4

Max nTPM: 103.9
Min nTPM: 63.1
Sample A Female 103.9
Sample B Female 75.8
Sample C Male 75.9
Sample D Male 63.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

170.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 170.0
Samples: 4

Max nTPM: 179.7
Min nTPM: 162.9
Sample A Male 163.7
Sample B Male 179.7
Sample C Female 173.6
Sample D Female 162.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

14.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 14.8
386010 Antisense, RP_040625_01_H10, Mouse strain C57BL/6J (56 days, male) 14.8

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