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TAGLN3
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  • TISSUE

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  • TAGLN3
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:263.6 nTPM
HPA Brain:307.5 nTPM
GTEx:263.6 nTPM
Pig:240.9 nTPM
Mouse:345.4 nTPM
Allen mouse:10.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

307.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 307.5
2226 Male, age 75, left hemisphere 482.6
1961 Female, age 42, unknown 132.5
Dorsomedial nucleus
nTPM: 126.8
1989 Male, age 62, unknown 164.7
2041 Female, age 72, unknown 121.2
2017 Female, age 42, unknown 94.5
Lateral hypothalamic area
nTPM: 290.1
2228 Male, age 66, unknown 507.0
2271 Male, age 75, both hemispheres 349.2
1791 Male, age 80, right hemisphere 186.4
2412 Male, age 62, unknown 117.7
Mammillary body
nTPM: 124.2
1923 Female, age 72, unknown 204.1
2413 Male, age 66, unknown 140.1
1948 Female, age 72, unknown 102.3
1945 Male, age 80, right hemisphere 96.5
1834 Female, age 42, unknown 78.1
Paraventricular nucleus
nTPM: 117.8
2700 Male, age 62, unknown 117.8
Preoptic area
nTPM: 129.6
1907 Male, age 80, right hemisphere 198.2
1861 Female, age 42, unknown 95.5
2414 Female, age 72, unknown 95.2
Supraoptic nucleus
nTPM: 98.5
2835 Female, age 72, unknown 106.9
1894 Female, age 72, unknown 103.7
2043 Male, age 62, unknown 85.0
Ventromedial nucleus
nTPM: 159.6
1982 Female, age 72, unknown 187.3
1822 Female, age 42, unknown 131.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

263.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 263.6
Samples: 257

Max nTPM: 609.1
Min nTPM: 36.5
Std nTPM: 93.3
Median nTPM: 261.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 609.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 524.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 476.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 469.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 452.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 452.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 439.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 436.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 436.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 431.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 430.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 425.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 416.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 415.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 414.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 410.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 409.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 404.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 403.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 390.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 389.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 382.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 376.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 374.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 373.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 372.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 371.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 371.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 369.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 369.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 368.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 363.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 362.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 361.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 361.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 361.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 361.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 360.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 358.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 358.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 357.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 356.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 350.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 350.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 350.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 348.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 348.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 346.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 346.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 341.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 337.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 337.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 337.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 337.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 336.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 335.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 335.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 334.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 333.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 333.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 332.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 332.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 330.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 329.4
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 329.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 328.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 328.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 326.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 324.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 322.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 322.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 322.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 321.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 319.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 318.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 317.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 316.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 316.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 316.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 315.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 310.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 309.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 308.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 307.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 306.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 305.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 304.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 303.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 302.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 300.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 296.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 295.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 294.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 293.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 292.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 291.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 289.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 287.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 287.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 286.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 285.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 285.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 284.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 284.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 284.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 283.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 283.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 283.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 282.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 281.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 281.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 280.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 280.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 278.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 276.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 276.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 274.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 273.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 273.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 272.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 269.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 268.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 267.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 265.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 265.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 263.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 263.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 263.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 261.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 257.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 257.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 256.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 256.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 256.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 256.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 255.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 255.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 254.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 252.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 252.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 251.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 250.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 250.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 247.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 246.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 245.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 244.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 244.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 244.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 243.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 241.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 241.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 240.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 239.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 239.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 238.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 237.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 237.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 237.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 236.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 236.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 235.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 235.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 234.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 233.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 233.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 231.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 231.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 231.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 230.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 229.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 228.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 227.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 225.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 225.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 225.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 224.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 224.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 222.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 221.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 221.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 219.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 219.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 218.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 216.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 216.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 212.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 212.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 209.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 209.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 206.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 205.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 202.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 202.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 198.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 194.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 193.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 191.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 189.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 189.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 189.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 187.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 186.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 185.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 185.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 182.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 181.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 180.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 180.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 180.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 179.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 179.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 175.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 175.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 173.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 172.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 172.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 168.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 165.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 164.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 164.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 162.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 160.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 158.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 157.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 155.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 155.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 149.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 145.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 145.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 142.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 141.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 139.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 136.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 134.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 128.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 121.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 120.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 120.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 119.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 112.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 111.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 109.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 108.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 105.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 102.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 99.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 92.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 91.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 89.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 76.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 72.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 72.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 58.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 46.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 41.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 36.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

240.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 240.9
Samples: 4

Max nTPM: 313.5
Min nTPM: 193.9
Sample A Female 313.5
Sample B Female 221.6
Sample C Male 193.9
Sample D Male 234.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

345.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 345.4
Samples: 4

Max nTPM: 378.0
Min nTPM: 321.7
Sample A Male 321.7
Sample B Male 378.0
Sample C Female 355.7
Sample D Female 326.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 10.5
75988633 Antisense, RP_060620_02_E05, Mouse strain C57BL/6J (56 days, male) 12.2
71280733 Antisense, RP_050818_01_E04, Mouse strain C57BL/6J (56 days, male) 8.9

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