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  • SUMMARY

  • TISSUE

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  • DAAM2
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:77.4 nTPM
HPA Brain:247.1 nTPM
GTEx:77.4 nTPM
Pig:111.9 nTPM
Mouse:6.7 nTPM
Allen mouse:5.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

247.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 52.6
2226 Male, age 75, left hemisphere 53.0
1961 Female, age 42, unknown 52.3
Dorsomedial nucleus
nTPM: 133.9
2017 Female, age 42, unknown 172.7
1989 Male, age 62, unknown 145.3
2041 Female, age 72, unknown 83.7
Lateral hypothalamic area
nTPM: 156.0
2412 Male, age 62, unknown 194.6
1791 Male, age 80, right hemisphere 159.8
2228 Male, age 66, unknown 149.4
2271 Male, age 75, both hemispheres 120.1
Mammillary body
nTPM: 201.9
1834 Female, age 42, unknown 283.4
1945 Male, age 80, right hemisphere 234.8
1948 Female, age 72, unknown 193.5
2413 Male, age 66, unknown 156.0
1923 Female, age 72, unknown 141.9
Paraventricular nucleus
nTPM: 247.1
2700 Male, age 62, unknown 247.1
Preoptic area
nTPM: 156.1
2414 Female, age 72, unknown 244.9
1861 Female, age 42, unknown 167.7
1907 Male, age 80, right hemisphere 55.5
Supraoptic nucleus
nTPM: 237.6
1894 Female, age 72, unknown 258.5
2043 Male, age 62, unknown 257.5
2835 Female, age 72, unknown 196.9
Ventromedial nucleus
nTPM: 60.6
1982 Female, age 72, unknown 65.6
1822 Female, age 42, unknown 55.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

77.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 77.4
Samples: 257

Max nTPM: 350.0
Min nTPM: 5.6
Std nTPM: 59.9
Median nTPM: 60.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 350.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 334.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 333.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 323.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 321.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 297.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 229.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 218.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 214.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 201.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 188.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 185.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 184.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 183.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 180.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 177.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 175.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 174.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 173.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 172.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 161.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 161.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 161.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 158.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 157.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 154.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 153.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 149.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 148.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 144.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 143.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 142.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 140.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 139.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 135.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 134.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 134.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 133.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 129.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 129.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 128.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 127.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 125.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 124.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 122.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 121.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 121.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 120.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 119.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 118.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 117.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 115.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 115.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 113.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 108.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 105.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 105.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 104.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 104.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 103.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 100.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 100.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 100.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 100.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 98.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 96.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 95.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 94.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 94.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 93.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 92.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 91.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 89.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 89.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 89.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 88.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 86.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 86.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 86.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 85.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 85.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 84.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 83.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 83.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 82.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 81.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 81.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 79.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 78.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 78.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 77.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 76.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 76.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 75.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 75.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 74.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 72.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 72.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 72.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 71.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 71.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 71.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 69.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 69.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 68.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 68.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 65.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 65.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 64.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 64.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 64.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 64.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 63.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 63.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 63.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 63.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 63.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 63.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 62.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 62.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 62.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 62.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 62.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 61.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 61.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 61.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 60.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 60.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 60.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 59.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 58.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 58.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 57.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 57.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 56.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 56.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 56.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 56.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 56.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 55.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 55.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 54.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 54.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 53.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 53.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 53.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 53.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 53.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 53.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 52.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 52.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 51.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 51.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 51.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 50.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 50.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 49.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 49.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 49.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 48.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 48.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 48.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 48.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 47.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 46.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 46.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 46.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 45.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 45.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 45.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 44.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 44.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 44.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 44.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 43.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 43.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 43.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 43.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 43.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 43.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 42.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 42.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 41.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 41.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 40.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 40.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 40.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 40.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 39.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 39.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 38.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 38.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 38.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 37.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 37.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 37.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 36.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 36.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 36.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 36.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 35.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 34.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 34.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 32.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 32.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 31.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 31.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 31.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 31.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 31.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 30.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 30.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 30.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 29.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 29.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 29.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 29.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 29.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 28.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 28.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 28.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 28.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 28.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 27.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 27.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 27.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 27.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 26.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 26.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 25.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 25.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 25.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 25.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 25.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 24.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 24.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 23.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 23.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 22.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 21.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 21.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 20.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 19.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 19.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 19.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 19.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 19.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 18.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 16.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 16.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 15.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 13.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 11.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 11.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 11.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 6.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 5.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

111.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 111.8
Samples: 4

Max nTPM: 145.5
Min nTPM: 58.9
Sample A Female 117.7
Sample B Female 145.5
Sample C Male 125.2
Sample D Male 58.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

6.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 6.7
Samples: 4

Max nTPM: 8.0
Min nTPM: 5.7
Sample A Male 5.7
Sample B Male 6.1
Sample C Female 6.9
Sample D Female 8.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 5.6
74511880 Antisense, RP_051121_04_A01, Mouse strain C57BL/6J (56 days, male) 7.4
68667288 Antisense, RP_050201_02_A02, Mouse strain C57BL/6J (56 days, male) 3.9

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