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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

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  • CELL LINE

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  • EVOLUTION

  • RPL7
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:413.2 nTPM
GTEx:796.1 nTPM
FANTOM5:2.5 Scaled Tags Per Million
Pig:401.2 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

413.2
Sample id Sample description nTPM
Putamen
nTPM: 413.2
1838 Male, age 80, right hemisphere 469.5
2466 Female, age 79, unknown 456.2
1937 Female, age 91, right hemisphere 454.8
1829 Male, age 74, unknown 443.3
2482 Female, age 94, left hemisphere 394.5
2647 Male, age 75, left hemisphere 361.9
2489 Female, age 72, unknown 312.0

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

796.1
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 796.1
Samples: 254

Max nTPM: 1477.5
Min nTPM: 400.8
Std nTPM: 197.9
Median nTPM: 779.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1477.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1459.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1453.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1404.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1391.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1364.6
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 1352.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1347.5
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 1347.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1200.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1161.0
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 1152.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1123.1
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 1112.5
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 1110.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1107.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1097.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1088.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1087.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1062.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1057.7
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 1056.3
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 1055.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1054.1
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 1051.8
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 1050.7
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 1050.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1049.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1046.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1036.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 1034.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1030.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 1028.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1027.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 1025.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 1004.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1002.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1001.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1000.8
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 998.6
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 995.7
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 988.0
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 980.5
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 967.1
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 965.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 963.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 952.5
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 950.5
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 949.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 947.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 943.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 938.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 928.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 924.2
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 912.9
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 912.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 911.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 910.0
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 906.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 904.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 904.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 895.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 891.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 890.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 887.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 885.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 876.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 874.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 874.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 874.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 872.9
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 872.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 870.5
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 868.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 864.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 859.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 859.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 855.8
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 853.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 852.5
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 852.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 851.9
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 847.5
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 844.7
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 844.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 841.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 841.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 840.1
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 839.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 837.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 835.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 833.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 833.4
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 832.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 831.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 831.2
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 829.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 825.3
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 820.9
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 820.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 820.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 819.5
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 814.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 814.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 813.8
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 809.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 808.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 806.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 802.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 802.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 801.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 801.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 800.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 797.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 797.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 796.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 796.9
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 794.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 793.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 789.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 788.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 788.4
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 787.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 786.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 783.7
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 783.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 780.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 779.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 778.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 777.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 768.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 765.8
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 758.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 757.6
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 756.9
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 756.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 754.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 751.4
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 750.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 748.2
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 748.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 747.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 746.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 745.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 743.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 740.1
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 739.3
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 737.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 736.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 732.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 732.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 732.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 731.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 731.6
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 727.1
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 725.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 724.2
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 724.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 723.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 721.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 718.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 712.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 711.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 708.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 706.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 702.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 700.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 700.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 697.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 693.7
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 691.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 689.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 687.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 684.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 684.1
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 683.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 682.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 676.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 675.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 670.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 669.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 669.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 666.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 664.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 664.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 663.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 654.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 652.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 648.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 648.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 647.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 646.9
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 646.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 645.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 644.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 637.4
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 636.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 636.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 632.1
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 631.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 629.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 629.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 628.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 628.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 627.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 626.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 626.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 623.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 622.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 622.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 619.4
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 615.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 613.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 602.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 600.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 597.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 595.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 595.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 595.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 590.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 589.4
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 584.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 581.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 580.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 575.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 574.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 573.8
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 572.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 568.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 561.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 560.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 560.0
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 554.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 549.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 548.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 545.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 540.9
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 540.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 538.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 537.5
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 536.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 535.7
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 522.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 520.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 513.6
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 511.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 506.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 504.6
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 502.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 489.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 489.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 478.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 474.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 400.8
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

2.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 2.5
FF:10176-103C5 60 years, female 2.5

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

401.2
Pig sample Sample description nTPM
Putamen
nTPM: 401.1
Samples: 3

Max nTPM: 483.3
Min nTPM: 328.7
Sample B Female 328.7
Sample C Male 483.3
Sample D Male 391.4

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