A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
7211.2
nTPM
Monaco:
1239.9
nTPM
Schmiedel:
49.4
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
7211.2
HPA sample
nTPM
Classical monocyte nTPM: 7211.2
Samples: 6
Max nTPM: 9340.5
Min nTPM: 4963.8
P10809_1003
8477.7
P10809_1020
6758.6
P10809_1039
9340.5
P10809_1058
6015.7
P10809_1080
4963.8
P10809_1107
7710.9
Intermediate monocyte nTPM: 5975.8
Samples: 6
Max nTPM: 8418.4
Min nTPM: 3735.0
P10809_1004
3735.0
P10809_1023
7741.1
P10809_1042
5983.1
P10809_1061
5158.1
P10809_1081
4819.3
P10809_1108
8418.4
Non-classical monocyte nTPM: 5334.0
Samples: 5
Max nTPM: 7050.3
Min nTPM: 3483.2
P10809_1005
3483.2
P10809_1053
5639.9
P10809_1072
5597.1
P10809_1082
4899.7
P10809_1109
7050.3
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
1239.9
Monaco sample
nTPM
Classical monocyte nTPM: 1239.2
Samples: 4
Max nTPM: 1511.3
Min nTPM: 918.5
RHH5313_R3680
1064.0
RHH5221_R3593
918.5
RHH5250_R3622
1511.3
RHH5279_R3651
1463.1
Intermediate monocyte nTPM: 1239.9
Samples: 4
Max nTPM: 1423.2
Min nTPM: 1022.2
RHH5314_R3681
1419.1
RHH5222_R3594
1022.2
RHH5251_R3623
1094.9
RHH5280_R3652
1423.2
Non-classical monocyte nTPM: 885.1
Samples: 4
Max nTPM: 1111.9
Min nTPM: 674.8
RHH5315_R3682
925.7
RHH5223_R3595
674.8
RHH5252_R3624
828.1
RHH5281_R3653
1111.9
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
49.4
Schmiedel sample id
TPM
Classical monocyte TPM: 48.4
Samples: 91
Max TPM: 70.3
Min TPM: 35.8
MONOCYTES_1
70.3
MONOCYTES_2
69.7
MONOCYTES_3
64.0
MONOCYTES_4
61.9
MONOCYTES_5
61.3
MONOCYTES_6
61.0
MONOCYTES_7
58.8
MONOCYTES_8
57.5
MONOCYTES_9
57.5
MONOCYTES_10
56.8
MONOCYTES_11
56.2
MONOCYTES_12
55.3
MONOCYTES_13
55.0
MONOCYTES_14
54.0
MONOCYTES_15
53.9
MONOCYTES_16
53.7
MONOCYTES_17
53.5
MONOCYTES_18
53.4
MONOCYTES_19
53.3
MONOCYTES_20
53.0
MONOCYTES_21
52.3
MONOCYTES_22
52.2
MONOCYTES_23
51.9
MONOCYTES_24
51.2
MONOCYTES_25
51.1
MONOCYTES_26
50.5
MONOCYTES_27
50.4
MONOCYTES_28
50.1
MONOCYTES_29
49.9
MONOCYTES_30
49.6
MONOCYTES_31
49.5
MONOCYTES_32
49.3
MONOCYTES_33
49.2
MONOCYTES_34
48.9
MONOCYTES_35
48.8
MONOCYTES_36
48.7
MONOCYTES_37
48.6
MONOCYTES_38
48.5
MONOCYTES_39
48.4
MONOCYTES_40
48.3
MONOCYTES_41
48.2
MONOCYTES_42
48.1
MONOCYTES_43
48.1
MONOCYTES_44
48.0
MONOCYTES_45
47.9
MONOCYTES_46
47.8
MONOCYTES_47
47.6
MONOCYTES_48
47.6
MONOCYTES_49
47.5
MONOCYTES_50
47.3
MONOCYTES_51
47.1
MONOCYTES_52
47.1
MONOCYTES_53
47.0
MONOCYTES_54
47.0
MONOCYTES_55
47.0
MONOCYTES_56
46.8
MONOCYTES_57
46.6
MONOCYTES_58
46.2
MONOCYTES_59
45.6
MONOCYTES_60
45.4
MONOCYTES_61
45.2
MONOCYTES_62
45.2
MONOCYTES_63
44.8
MONOCYTES_64
44.3
MONOCYTES_65
44.2
MONOCYTES_66
44.1
MONOCYTES_67
43.9
MONOCYTES_68
43.9
MONOCYTES_69
43.8
MONOCYTES_70
43.5
MONOCYTES_71
43.4
MONOCYTES_72
43.2
MONOCYTES_73
43.0
MONOCYTES_74
43.0
MONOCYTES_75
42.8
MONOCYTES_76
42.8
MONOCYTES_77
42.5
MONOCYTES_78
42.3
MONOCYTES_79
41.8
MONOCYTES_80
41.8
MONOCYTES_81
41.3
MONOCYTES_82
41.1
MONOCYTES_83
40.9
MONOCYTES_84
40.9
MONOCYTES_85
40.8
MONOCYTES_86
40.7
MONOCYTES_87
40.4
MONOCYTES_88
39.3
MONOCYTES_89
39.0
MONOCYTES_90
36.1
MONOCYTES_91
35.8
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Non-classical monocyte TPM: 49.4
Samples: 90
Max TPM: 80.2
Min TPM: 33.5
M2_1
80.2
M2_2
79.7
M2_3
70.4
M2_4
70.0
M2_5
68.4
M2_6
67.2
M2_7
63.1
M2_8
61.8
M2_9
59.9
M2_10
59.8
M2_11
59.6
M2_12
58.0
M2_13
57.9
M2_14
57.7
M2_15
57.3
M2_16
56.6
M2_17
56.0
M2_18
56.0
M2_19
55.7
M2_20
55.0
M2_21
54.4
M2_22
54.3
M2_23
53.6
M2_24
53.2
M2_25
52.7
M2_26
52.0
M2_27
51.6
M2_28
51.5
M2_29
51.3
M2_30
50.9
M2_31
50.8
M2_32
50.2
M2_33
49.6
M2_34
49.5
M2_35
48.8
M2_36
48.6
M2_37
48.6
M2_38
48.2
M2_39
48.1
M2_40
48.0
M2_41
48.0
M2_42
48.0
M2_43
47.9
M2_44
47.9
M2_45
47.5
M2_46
47.4
M2_47
47.1
M2_48
46.9
M2_49
46.3
M2_50
46.1
M2_51
46.0
M2_52
45.8
M2_53
45.8
M2_54
45.7
M2_55
45.7
M2_56
45.7
M2_57
45.6
M2_58
45.2
M2_59
45.1
M2_60
45.0
M2_61
45.0
M2_62
44.9
M2_63
44.9
M2_64
44.9
M2_65
44.2
M2_66
44.2
M2_67
43.9
M2_68
43.9
M2_69
43.8
M2_70
43.6
M2_71
43.4
M2_72
42.8
M2_73
42.7
M2_74
42.5
M2_75
42.4
M2_76
42.4
M2_77
42.3
M2_78
42.0
M2_79
41.0
M2_80
40.9
M2_81
40.8
M2_82
40.6
M2_83
40.2
M2_84
39.9
M2_85
39.7
M2_86
39.7
M2_87
39.6
M2_88
38.1
M2_89
35.1
M2_90
33.5
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