A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
770.8
nTPM
Monaco:
533.4
nTPM
Schmiedel:
331.3
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
770.8
HPA sample
nTPM
Classical monocyte nTPM: 770.8
Samples: 6
Max nTPM: 1658.2
Min nTPM: 428.5
P10809_1003
1658.2
P10809_1020
727.2
P10809_1039
677.2
P10809_1058
428.5
P10809_1080
515.2
P10809_1107
618.4
Intermediate monocyte nTPM: 515.2
Samples: 6
Max nTPM: 771.3
Min nTPM: 294.0
P10809_1004
544.2
P10809_1023
771.3
P10809_1042
294.0
P10809_1061
332.0
P10809_1081
452.1
P10809_1108
697.3
Non-classical monocyte nTPM: 513.9
Samples: 5
Max nTPM: 686.3
Min nTPM: 361.7
P10809_1005
606.9
P10809_1053
543.3
P10809_1072
371.4
P10809_1082
361.7
P10809_1109
686.3
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
533.4
Monaco sample
nTPM
Classical monocyte nTPM: 432.0
Samples: 4
Max nTPM: 552.6
Min nTPM: 268.6
RHH5313_R3680
366.0
RHH5221_R3593
268.6
RHH5250_R3622
540.8
RHH5279_R3651
552.6
Intermediate monocyte nTPM: 533.4
Samples: 4
Max nTPM: 720.2
Min nTPM: 418.7
RHH5314_R3681
720.2
RHH5222_R3594
418.7
RHH5251_R3623
446.8
RHH5280_R3652
548.0
Non-classical monocyte nTPM: 362.5
Samples: 4
Max nTPM: 443.7
Min nTPM: 250.1
RHH5315_R3682
443.7
RHH5223_R3595
250.1
RHH5252_R3624
343.3
RHH5281_R3653
412.7
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
331.3
Schmiedel sample id
TPM
Classical monocyte TPM: 331.3
Samples: 91
Max TPM: 412.5
Min TPM: 239.3
MONOCYTES_1
412.5
MONOCYTES_2
400.4
MONOCYTES_3
392.0
MONOCYTES_4
391.0
MONOCYTES_5
390.8
MONOCYTES_6
386.2
MONOCYTES_7
385.9
MONOCYTES_8
384.6
MONOCYTES_9
383.0
MONOCYTES_10
375.9
MONOCYTES_11
375.2
MONOCYTES_12
373.4
MONOCYTES_13
370.8
MONOCYTES_14
370.2
MONOCYTES_15
369.2
MONOCYTES_16
368.4
MONOCYTES_17
365.5
MONOCYTES_18
362.2
MONOCYTES_19
361.3
MONOCYTES_20
360.3
MONOCYTES_21
360.3
MONOCYTES_22
357.2
MONOCYTES_23
356.6
MONOCYTES_24
355.7
MONOCYTES_25
351.7
MONOCYTES_26
351.3
MONOCYTES_27
351.1
MONOCYTES_28
351.0
MONOCYTES_29
349.2
MONOCYTES_30
347.9
MONOCYTES_31
347.4
MONOCYTES_32
345.1
MONOCYTES_33
344.8
MONOCYTES_34
344.2
MONOCYTES_35
344.0
MONOCYTES_36
344.0
MONOCYTES_37
343.6
MONOCYTES_38
342.2
MONOCYTES_39
341.9
MONOCYTES_40
340.9
MONOCYTES_41
340.6
MONOCYTES_42
340.5
MONOCYTES_43
337.5
MONOCYTES_44
336.4
MONOCYTES_45
336.2
MONOCYTES_46
335.9
MONOCYTES_47
335.8
MONOCYTES_48
331.7
MONOCYTES_49
330.1
MONOCYTES_50
329.4
MONOCYTES_51
329.1
MONOCYTES_52
328.7
MONOCYTES_53
328.6
MONOCYTES_54
328.2
MONOCYTES_55
327.9
MONOCYTES_56
326.2
MONOCYTES_57
326.1
MONOCYTES_58
325.9
MONOCYTES_59
323.7
MONOCYTES_60
322.8
MONOCYTES_61
322.5
MONOCYTES_62
318.3
MONOCYTES_63
316.2
MONOCYTES_64
313.2
MONOCYTES_65
313.2
MONOCYTES_66
313.1
MONOCYTES_67
308.6
MONOCYTES_68
308.4
MONOCYTES_69
307.8
MONOCYTES_70
306.7
MONOCYTES_71
303.8
MONOCYTES_72
302.4
MONOCYTES_73
301.6
MONOCYTES_74
299.8
MONOCYTES_75
290.7
MONOCYTES_76
288.8
MONOCYTES_77
288.2
MONOCYTES_78
287.1
MONOCYTES_79
283.1
MONOCYTES_80
281.8
MONOCYTES_81
281.6
MONOCYTES_82
279.5
MONOCYTES_83
275.8
MONOCYTES_84
274.9
MONOCYTES_85
273.5
MONOCYTES_86
269.8
MONOCYTES_87
265.4
MONOCYTES_88
263.8
MONOCYTES_89
251.2
MONOCYTES_90
244.7
MONOCYTES_91
239.3
Show allShow less
Non-classical monocyte TPM: 289.6
Samples: 90
Max TPM: 427.8
Min TPM: 165.1
M2_1
427.8
M2_2
393.4
M2_3
377.5
M2_4
351.2
M2_5
349.5
M2_6
345.6
M2_7
341.7
M2_8
340.4
M2_9
340.4
M2_10
336.0
M2_11
335.9
M2_12
334.4
M2_13
332.6
M2_14
330.6
M2_15
330.2
M2_16
328.7
M2_17
328.3
M2_18
327.0
M2_19
326.5
M2_20
326.0
M2_21
324.6
M2_22
323.7
M2_23
322.6
M2_24
321.6
M2_25
321.0
M2_26
319.9
M2_27
317.3
M2_28
313.4
M2_29
312.8
M2_30
310.1
M2_31
307.0
M2_32
307.0
M2_33
306.5
M2_34
304.7
M2_35
303.8
M2_36
303.4
M2_37
303.1
M2_38
303.1
M2_39
302.7
M2_40
301.4
M2_41
301.0
M2_42
297.5
M2_43
297.3
M2_44
296.2
M2_45
294.9
M2_46
293.8
M2_47
291.2
M2_48
290.6
M2_49
290.3
M2_50
289.3
M2_51
286.3
M2_52
285.7
M2_53
285.1
M2_54
284.8
M2_55
284.6
M2_56
283.5
M2_57
282.4
M2_58
280.2
M2_59
278.8
M2_60
278.7
M2_61
278.7
M2_62
278.6
M2_63
277.6
M2_64
275.0
M2_65
272.9
M2_66
272.8
M2_67
271.4
M2_68
269.0
M2_69
266.4
M2_70
266.3
M2_71
265.5
M2_72
264.2
M2_73
262.5
M2_74
240.8
M2_75
239.6
M2_76
239.2
M2_77
237.5
M2_78
228.9
M2_79
226.4
M2_80
225.3
M2_81
219.7
M2_82
217.2
M2_83
217.2
M2_84
211.1
M2_85
207.6
M2_86
201.2
M2_87
195.8
M2_88
194.1
M2_89
172.5
M2_90
165.1
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.