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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Follicle cells: Not detected
Ovarian stroma cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:2900.0 nTPM
HPA:2900.0 nTPM
GTEx:2761.5 nTPM
FANTOM5:1300.9 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA063339
Follicle cells Not detected
Ovarian stroma cells Not detected



OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2900.0
overview
Female, age 64
Ovary sample 192
nTPM: 2217.3
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 3684.5
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 2226.5
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 2247.3
N/A
Female, age 16
Ovary sample 3663
nTPM: 5654.8
N/A
Female, age 20
Ovary sample 3664
nTPM: 2685
N/A
Female, age 32
Ovary sample 3665
nTPM: 1584.7

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2761.5
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 2761.5
Samples: 193

Max nTPM: 5844.9
Min nTPM: 932.0
Std nTPM: 909.8
Median nTPM: 2664.4
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 5844.9
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 5608.7
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 5481.1
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 5131.0
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 5044.2
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 4831.3
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 4796.5
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 4651.4
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 4611.1
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 4515.3
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 4276.4
GTEX-183WM-1926-SM-72D5F 70-79 years, female 4230.3
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 4137.3
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 4030.7
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 4013.6
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 3989.5
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 3980.6
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 3959.2
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 3926.7
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 3902.9
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 3887.9
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 3870.8
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 3861.8
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 3814.0
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 3779.9
GTEX-13SLX-2426-SM-664OM 50-59 years, female 3764.7
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 3688.0
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 3685.1
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 3661.8
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 3655.0
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 3643.8
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 3630.3
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 3624.0
GTEX-14BIN-1426-SM-664NI 50-59 years, female 3580.6
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 3566.3
GTEX-11I78-1926-SM-59878 50-59 years, female 3531.9
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 3521.7
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 3505.0
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 3463.5
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 3439.4
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 3418.1
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 3414.4
GTEX-RU72-2226-SM-46MUE 50-59 years, female 3409.8
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 3396.8
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 3387.5
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 3376.1
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 3364.5
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 3346.7
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 3335.3
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 3325.0
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 3310.4
GTEX-15EOM-1526-SM-68723 20-29 years, female 3271.0
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 3268.5
GTEX-QVJO-3126-SM-COH22 60-69 years, female 3169.6
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 3167.8
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 3136.5
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 3099.5
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 3094.2
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 3079.8
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 3073.9
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 3062.1
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 3051.7
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 3049.9
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 3042.9
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 3032.3
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 3016.2
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 3007.3
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 3006.2
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 2999.3
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 2963.1
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 2963.1
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 2955.2
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 2941.4
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 2920.4
GTEX-145ME-1226-SM-5MR87 40-49 years, female 2907.0
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 2905.9
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 2875.0
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 2874.0
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 2873.1
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 2863.8
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 2840.2
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 2828.7
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 2820.1
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 2812.3
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 2809.3
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 2807.5
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 2777.5
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 2772.6
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 2761.3
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 2711.7
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 2707.3
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 2706.9
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 2706.6
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 2699.7
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 2693.0
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 2693.0
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 2664.4
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 2661.0
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 2644.2
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 2642.2
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 2632.4
GTEX-S32W-1226-SM-4AD67 50-59 years, female 2597.5
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 2595.6
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 2591.4
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 2582.8
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 2577.2
GTEX-18D9A-0826-SM-718C1 30-39 years, female 2576.8
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 2566.6
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 2532.3
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 2529.8
GTEX-14PKV-1226-SM-6871T 20-29 years, female 2528.4
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 2523.9
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 2512.2
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 2496.0
GTEX-S341-0726-SM-4AD5R 40-49 years, female 2456.4
GTEX-P78B-1926-SM-3P616 40-49 years, female 2450.2
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 2447.8
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 2429.0
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 2426.6
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 2425.6
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 2407.5
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 2396.9
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 2392.6
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 2387.7
GTEX-QCQG-1426-SM-48U22 50-59 years, female 2384.3
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 2382.2
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 2377.7
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 2362.4
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 2352.0
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 2339.2
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 2331.7
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 2329.5
GTEX-R45C-2526-SM-GRR28 60-69 years, female 2319.6
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 2315.4
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 2312.7
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 2303.1
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 2282.6
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 2278.2
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 2272.5
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 2201.2
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 2188.6
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 2180.6
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 2173.7
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 2173.5
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 2142.7
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 2142.4
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 2096.2
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 2082.4
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 2081.9
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 2066.5
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 2066.1
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 2047.1
GTEX-Q734-0726-SM-48TZP 40-49 years, female 1997.4
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 1983.2
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 1961.7
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 1960.9
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 1952.6
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 1931.1
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 1920.1
GTEX-14JG6-0626-SM-68716 30-39 years, female 1900.1
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 1897.3
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 1891.4
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 1888.1
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 1883.7
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 1841.3
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 1829.6
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 1761.0
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 1750.3
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 1715.2
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 1695.9
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 1692.9
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 1688.3
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 1666.3
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 1614.2
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 1595.4
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 1551.6
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 1540.4
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 1539.0
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 1512.1
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 1490.2
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 1484.1
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 1470.6
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 1463.3
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 1444.5
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 1416.8
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 1416.3
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 1389.8
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 1389.4
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 1372.5
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 1168.2
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 1114.3
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 945.6
GTEX-R55G-1526-SM-48FER 40-49 years, female 932.0
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1300.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 1300.9
FF:10020-101D2 47,75,84 years, female 1300.9

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