HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:83.5 nTPM
HPA Brain:151.2 nTPM
GTEx:83.5 nTPM
FANTOM5:209.9 Scaled Tags Per Million
Pig:94.1 nTPM
Mouse:22.5 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005464
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 151.2
Sample id Sample description nTPM
Hippocampus
nTPM: 126.3
1911 Female, age 85, right hemisphere 148.5
2529 Female, age 94, left hemisphere 144.4
1855 Male, age 76, left hemisphere 123.4
2148 Female, age 91, left hemisphere 121.0
1898 Male, age 80, left hemisphere 110.3
2621 Female, age 67, right hemisphere 110.1
Dentate gyrus
nTPM: 119.2
2530 Female, age 94, left hemisphere 146.7
2010 Male, age 76, both hemispheres 137.3
2528 Male, age 74, both hemispheres 126.0
2246 Female, age 85, both hemispheres 116.2
2531 Female, age 67, both hemispheres 97.7
1927 Female, age 91, both hemispheres 91.6
Entorhinal gyrus
nTPM: 123.5
2117 Female, age 91, right hemisphere 178.4
2764 Male, age 80, right hemisphere 125.7
2686 Male, age 75, right hemisphere 120.6
1938 Female, age 85, left hemisphere 116.2
1787 Male, age 76, left hemisphere 103.8
2613 Female, age 94, left hemisphere 96.4
Hippocampus, CA1
nTPM: 116.3
2527 Male, age 74, both hemispheres 130.4
1873 Female, age 85, both hemispheres 122.8
2082 Female, age 91, right hemisphere 119.5
2749 Male, age 80, left hemisphere 111.0
2045 Male, age 76, both hemispheres 97.9
Hippocampus, CA2
nTPM: 118.5
2113 Female, age 91, right hemisphere 132.6
1963 Male, age 80, left hemisphere 132.0
2249 Male, age 74, both hemispheres 128.9
1940 Female, age 85, left hemisphere 114.0
2437 Female, age 94, left hemisphere 112.5
1892 Male, age 76, both hemispheres 90.7
Hippocampus, CA3
nTPM: 109.5
1891 Female, age 85, both hemispheres 155.0
1867 Male, age 76, both hemispheres 121.9
2137 Male, age 80, left hemisphere 113.7
2436 Male, age 74, both hemispheres 106.2
2861 Female, age 67, both hemispheres 82.7
2620 Female, age 94, left hemisphere 77.6
Parahippocampal cortex
nTPM: 116.9
2692 Male, age 74, both hemispheres 147.0
2018 Male, age 76, both hemispheres 135.9
2532 Female, age 72, left hemisphere 131.2
1990 Female, age 91, right hemisphere 120.8
1933 Female, age 85, both hemispheres 118.4
1850 Male, age 80, both hemispheres 116.2
2245 Female, age 91, both hemispheres 114.2
2693 Female, age 94, both hemispheres 98.9
2622 Female, age 67, right hemisphere 97.2
2250 Female, age 67, right hemisphere 89.5
Perirhinal gyrus
nTPM: 96.9
2848 Male, age 76, right hemisphere 99.5
2521 Female, age 94, right hemisphere 99.4
1841 Female, age 85, right hemisphere 97.8
1794 Male, age 80, right hemisphere 95.4
1847 Female, age 91, left hemisphere 92.5
Subiculum
nTPM: 151.2
2042 Male, age 76, both hemispheres 192.7
1901 Male, age 80, both hemispheres 163.8
2438 Female, age 94, left hemisphere 141.6
2729 Female, age 91, right hemisphere 141.6
1977 Female, age 85, both hemispheres 139.7
2619 Male, age 74, both hemispheres 127.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 83.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 83.5
Samples: 255

Max nTPM: 235.1
Min nTPM: 27.7
Std nTPM: 35.4
Median nTPM: 73.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 235.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 231.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 200.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 191.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 172.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 166.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 162.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 160.6
GTEX-13PLJ-0011-R1a-SM-GJ3QF 60-69 years, female 160.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 160.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 158.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 209.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 209.9
FF:10153-102I9 76 years, female 254.6
FF:10169-103B7 60 years, female 165.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 94.1
Pig sample Sample description nTPM
Subiculum
nTPM: 61.6
Samples: 4

Max nTPM: 69.6
Min nTPM: 56.8
Sample A Female 69.6
Sample B Female 61.1
Sample C Male 56.8
Sample D Male 58.9
Dorsal hippocampus
nTPM: 94.2
Samples: 4

Max nTPM: 125.9
Min nTPM: 56.8
Sample A Female 125.9
Sample B Female 80.1
Sample C Male 113.8
Sample D Male 56.8
Entorhinal cortex
nTPM: 52.8
Samples: 4

Max nTPM: 61.4
Min nTPM: 48.3
Sample A Female 48.6
Sample B Female 61.4
Sample C Male 52.7
Sample D Male 48.3
Ventral hippocampus
nTPM: 76.0
Samples: 4

Max nTPM: 92.4
Min nTPM: 59.2
Sample A Female 82.2
Sample B Female 59.2
Sample C Male 70.1
Sample D Male 92.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 22.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.6
Samples: 4

Max nTPM: 22.5
Min nTPM: 20.3
Sample A Male 21.6
Sample B Male 20.3
Sample C Female 22.0
Sample D Female 22.5
Hippocampal formation
nTPM: 22.6
Samples: 4

Max nTPM: 23.7
Min nTPM: 21.0
Sample A Male 21.0
Sample B Male 22.5
Sample C Female 23.7
Sample D Female 23.0

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