A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
11.4
nTPM
Monaco:
358.6
nTPM
Schmiedel:
205.2
TPM
NK-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
11.4
HPA sample
nTPM
NK-cell nTPM: 11.4
Samples: 6
Max nTPM: 25.1
Min nTPM: 3.2
P10809_1013
4.8
P10809_1033
8.1
P10809_1052
9.0
P10809_1071
3.2
P10809_1093
25.1
P10809_1103
18.1
NK-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
358.6
Monaco sample
nTPM
NK-cell nTPM: 358.6
Samples: 4
Max nTPM: 441.4
Min nTPM: 282.7
RHH5316_R3683
387.9
RHH5224_R3596
282.7
RHH5253_R3625
441.4
RHH5282_R3654
322.5
NK-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
205.2
Schmiedel sample id
TPM
NK-cell TPM: 205.2
Samples: 90
Max TPM: 394.6
Min TPM: 57.6
NK_1
394.6
NK_2
383.2
NK_3
375.6
NK_4
372.3
NK_5
354.5
NK_6
352.8
NK_7
352.6
NK_8
343.0
NK_9
339.2
NK_10
325.8
NK_11
319.1
NK_12
312.1
NK_13
309.4
NK_14
304.7
NK_15
303.3
NK_16
300.6
NK_17
298.7
NK_18
297.3
NK_19
294.0
NK_20
291.6
NK_21
288.7
NK_22
278.6
NK_23
271.0
NK_24
269.1
NK_25
259.7
NK_26
258.2
NK_27
251.1
NK_28
249.9
NK_29
249.5
NK_30
241.9
NK_31
236.4
NK_32
234.5
NK_33
232.0
NK_34
228.9
NK_35
228.5
NK_36
221.6
NK_37
215.6
NK_38
213.4
NK_39
206.4
NK_40
205.9
NK_41
205.0
NK_42
204.7
NK_43
201.7
NK_44
199.3
NK_45
198.5
NK_46
194.2
NK_47
193.6
NK_48
184.9
NK_49
184.3
NK_50
178.9
NK_51
177.9
NK_52
176.2
NK_53
175.3
NK_54
174.6
NK_55
172.9
NK_56
171.8
NK_57
171.3
NK_58
162.9
NK_59
162.2
NK_60
160.9
NK_61
158.9
NK_62
158.6
NK_63
155.6
NK_64
154.9
NK_65
154.4
NK_66
141.8
NK_67
137.5
NK_68
131.5
NK_69
130.3
NK_70
129.6
NK_71
128.8
NK_72
128.3
NK_73
125.7
NK_74
124.2
NK_75
121.5
NK_76
119.6
NK_77
116.0
NK_78
112.3
NK_79
110.9
NK_80
94.8
NK_81
92.3
NK_82
91.0
NK_83
77.4
NK_84
75.0
NK_85
73.3
NK_86
71.6
NK_87
65.0
NK_88
58.3
NK_89
57.6
NK_90
57.6
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.