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  • SUMMARY

  • TISSUE

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  • TPPP3
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expression
Hypothalamusi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Neuronal projections: Not detected
Synapses: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:276.0 nTPM
HPA Brain:222.2 nTPM
GTEx:276.0 nTPM
Pig:120.6 nTPM
Mouse:156.9 nTPM
Allen mouse:11.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Extended tissue profilei

For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.

, antibody HPA061691
Glial cells Medium
Neuronal cells Not detected
Neuronal projections Not detected
Synapses Not detected

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

222.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 150.8
1961 Female, age 42, unknown 169.8
2226 Male, age 75, left hemisphere 131.8
Dorsomedial nucleus
nTPM: 163.0
1989 Male, age 62, unknown 184.5
2041 Female, age 72, unknown 177.9
2017 Female, age 42, unknown 126.7
Lateral hypothalamic area
nTPM: 171.6
1791 Male, age 80, right hemisphere 239.1
2271 Male, age 75, both hemispheres 189.9
2228 Male, age 66, unknown 155.1
2412 Male, age 62, unknown 102.2
Mammillary body
nTPM: 127.5
1834 Female, age 42, unknown 157.9
1923 Female, age 72, unknown 128.7
1948 Female, age 72, unknown 128.4
1945 Male, age 80, right hemisphere 125.4
2413 Male, age 66, unknown 97.2
Paraventricular nucleus
nTPM: 156.0
2700 Male, age 62, unknown 156.0
Preoptic area
nTPM: 127.3
2414 Female, age 72, unknown 156.7
1907 Male, age 80, right hemisphere 124.6
1861 Female, age 42, unknown 100.5
Supraoptic nucleus
nTPM: 214.9
2043 Male, age 62, unknown 255.4
1894 Female, age 72, unknown 244.0
2835 Female, age 72, unknown 145.3
Ventromedial nucleus
nTPM: 222.2
1982 Female, age 72, unknown 237.3
1822 Female, age 42, unknown 207.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

276.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 276.0
Samples: 257

Max nTPM: 736.9
Min nTPM: 35.0
Std nTPM: 114.8
Median nTPM: 262.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 736.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 683.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 600.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 575.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 572.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 568.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 555.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 548.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 545.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 540.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 540.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 535.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 523.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 508.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 492.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 484.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 483.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 482.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 469.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 467.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 463.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 457.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 450.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 447.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 425.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 425.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 422.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 421.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 418.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 413.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 411.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 406.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 405.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 403.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 399.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 396.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 393.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 384.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 380.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 379.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 375.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 374.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 369.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 364.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 363.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 363.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 361.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 358.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 357.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 355.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 347.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 347.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 343.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 341.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 339.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 337.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 332.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 330.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 329.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 327.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 326.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 326.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 324.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 324.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 324.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 322.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 322.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 319.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 319.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 317.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 317.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 313.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 312.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 312.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 312.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 311.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 308.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 308.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 308.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 307.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 307.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 306.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 304.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 303.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 302.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 300.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 300.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 298.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 296.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 294.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 292.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 292.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 291.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 290.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 290.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 290.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 289.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 289.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 289.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 287.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 287.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 285.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 285.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 284.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 284.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 283.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 282.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 282.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 281.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 279.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 279.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 278.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 277.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 276.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 276.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 275.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 272.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 272.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 271.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 271.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 268.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 267.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 267.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 265.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 265.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 264.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 264.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 264.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 262.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 261.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 261.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 260.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 259.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 259.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 259.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 258.3
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 258.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 258.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 257.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 254.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 254.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 253.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 252.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 252.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 249.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 248.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 248.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 247.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 247.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 245.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 245.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 244.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 243.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 243.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 243.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 239.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 239.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 236.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 235.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 235.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 232.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 231.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 231.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 231.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 231.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 230.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 229.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 229.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 228.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 228.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 228.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 227.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 226.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 226.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 224.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 223.1
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 222.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 221.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 220.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 218.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 217.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 211.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 210.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 208.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 204.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 204.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 203.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 203.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 202.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 201.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 201.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 200.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 199.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 199.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 197.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 196.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 195.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 195.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 193.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 192.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 191.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 190.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 188.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 187.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 187.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 185.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 184.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 184.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 181.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 181.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 181.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 180.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 179.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 178.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 176.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 176.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 173.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 168.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 167.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 166.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 165.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 161.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 160.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 158.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 157.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 154.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 152.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 150.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 148.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 147.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 144.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 143.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 141.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 139.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 137.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 134.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 134.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 132.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 132.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 127.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 127.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 124.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 120.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 115.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 107.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 106.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 102.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 101.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 95.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 95.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 94.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 90.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 89.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 70.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 63.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 42.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 35.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

120.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 120.6
Samples: 4

Max nTPM: 125.0
Min nTPM: 111.0
Sample A Female 124.9
Sample B Female 111.0
Sample C Male 125.0
Sample D Male 121.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

156.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 156.9
Samples: 4

Max nTPM: 177.5
Min nTPM: 141.6
Sample A Male 177.5
Sample B Male 163.7
Sample C Female 144.8
Sample D Female 141.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 11.8
68341262 Antisense, RP_041207_01_C02, Mouse strain C57BL/6J (56 days, male) 14.1
70813926 Antisense, RP_050725_02_F06, Mouse strain C57BL/6J (56 days, male) 9.5

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